RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Ercc5P35689 1170 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Hmgb1P63158 215 aaKnown RBP23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Lrrc55Q3UY51 311 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Kctd16Q5DTY9 427 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Ppp2r2aQ6P1F6 447 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Naif1Q6PFD7 327 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Naa25Q8BWZ3 972 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Mboat7Q8CHK3 473 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Tsc2Q61037 1814 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Apol7aB2RT54 418 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Krt78E9Q0F0 1068 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Ncf2O70145 525 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Epb41l4aP52963 686 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 MycbpapQ5SUV2 932 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Cnnm4Q69ZF7 771 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 RragaQ80X95 313 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Ttc7aQ8BGB2 858 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 MyripQ8K3I4 856 aa23.81■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Usp17lbE9Q9U0 468 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Zfp275G3X904 499 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 D1Pas1P16381 660 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Trmt1Q3TX08 663 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Mapk6Q61532 720 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 WlsQ6DID7 541 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Otop3Q80UF9 577 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 RadxQ8C779 850 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Alpk1Q9CXB8 1231 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Prss40A6H6T1 365 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Cfap70D3YVL2 1141 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Becn2P0DM65 447 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Lmnb1P14733 588 aaKnown RBP23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Sorbs1Q62417 1290 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Stn1Q8K2X3 378 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Mettl13Q91YR5 698 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 4930449I24RikQ9D5E3 319 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Serpinb6cW4VSP4 379 aa23.8■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 UncxO08934 530 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Calm1P0DP26 149 aaKnown RBP23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Calm2P0DP27 149 aaKnown RBP23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Calm3P0DP28 149 aaKnown RBP23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Fam207aP58468 219 aaKnown RBP23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Rpusd2Q149F1 553 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 QarsQ8BML9 775 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Kirrel3Q8BR86 778 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Pus7lQ8CE46 702 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Spata17Q9D552 379 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Myoz2Q9JJW5 264 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Tjp2Q9Z0U1 1167 aaKnown RBP23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Ctnna1P26231 906 aaKnown RBP23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Foxn3Q499D0 457 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Fxr1Q61584 677 aaKnown RBP23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Insm1Q63ZV0 521 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Ublcp1Q8BGR9 318 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 RalylQ8BTF8 293 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Slc35f6Q8VE96 372 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Ndst4Q9EQW8 872 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Gtf2iQ9ESZ8 998 aaKnown RBP23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Prl2c5Q9JLV9 222 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Rgs17Q9QZB0 210 aa23.79■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Stat4P42228 749 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Mars2Q499X9 586 aaKnown RBP23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Sh3gl1Q62419 368 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Eif2b5Q8CHW4 717 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Cwf19l1Q8CI33 537 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Mmtag2Q99LX5 260 aaKnown RBP23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Cul5Q9D5V5 780 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Cul1Q9WTX6 776 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Grik3B1AS29 919 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Otud7bB2RUR8 840 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 ChkbO55229 394 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Abl1P00520 1123 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 TbcaP48428 108 aaKnown RBP23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Terf1P70371 421 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Cacna2d4Q5RJF7 1116 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Asap3Q5U464 904 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Gpbp1Q6NXH3 473 aaKnown RBP23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Usp38Q8BW70 1042 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Rint1Q8BZ36 792 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Tmem60Q8K174 133 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Haus2Q9CQS9 234 aa23.78■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Plekhg2Q6KAU7 1340 aa23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Ebf2O08792 575 aa23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Lmnb2P21619 596 aaKnown RBP23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 IarsQ8BU30 1262 aa23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Klhl7Q8BUL5 586 aa23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Ccdc134Q8C7V8 229 aa23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Tor1aip1Q921T2 595 aaKnown RBP23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Abcf2Q99LE6 628 aaKnown RBP23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Rhobtb3Q9CTN4 611 aa23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Bub1bQ9Z1S0 1052 aa23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Prr16A3KMN5 304 aa23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Lrrfip1Q3UZ39 729 aaKnown RBP23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 HnrnpdQ60668 355 aaKnown RBP23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Shc3Q61120 474 aa23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 PodnQ7TQ62 611 aa23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Zbed4Q80WQ9 1168 aa23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Pkn3Q8K045 878 aa23.77■■□□□ 1.4
Ccdc9-201ENSMUST00000041010 Trappc11B2RXC1 1133 aa23.76■■□□□ 1.39
Ccdc9-201ENSMUST00000041010 Nr1i2O54915 431 aa23.76■■□□□ 1.39
Ccdc9-201ENSMUST00000041010 Cd44P15379 778 aa23.76■■□□□ 1.39
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms