RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 HnrnpcQ9Z204 313 aaKnown RBP9.52□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Nrbp2Q91V36 499 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Rps6ka4Q9Z2B9 773 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 RpsaP14206 295 aaKnown RBP9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 CstaP56567 97 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Bcar1Q61140 874 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Rfwd2Q9R1A8 733 aaKnown RBP9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Lonrf2B2RT44 518 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Sptlc1O35704 473 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Mt-CybP00158 381 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Surf1P09925 306 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Dab2P98078 766 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Itgb1bp2Q9R000 350 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Frmpd4A2AFR3 1320 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Lrrc74aA0A1Y7VMD6 494 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 AK157302I3ITR1 129 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Hmgb2P30681 210 aaKnown RBP9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Q8R1Y2 203 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Eif4a3Q91VC3 411 aaKnown RBP9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Krt5Q922U2 580 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Isca1Q9D924 129 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Gkap1Q9JMB0 366 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Gipc1Q9Z0G0 333 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Slc44a1Q6X893 653 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Kdm4cQ8VCD7 1054 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Mfap3Q922T2 349 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Sar1bQ9CQC9 198 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Adamts12Q811B3 1600 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 P01734 135 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ext2P70428 718 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Adcy8P97490 1249 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Cnga4Q3UW12 575 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Trim17Q7TPM3 477 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ccdc28aQ8CEI3 192 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Zfp597E9Q6S0 419 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 FcgrtQ61559 365 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Slc2a5Q9WV38 501 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Adat2Q6P6J0 191 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 D130040H23RikQ8BII3 405 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Hps6Q8BLY7 805 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Dnm3Q8BZ98 863 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Large1Q9Z1M7 756 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Pde4dipQ80YT7 2224 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Dsg3O35902 993 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Irf5P56477 497 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 S100a5P63084 93 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Apol7eQ3UZ24 369 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ush1gQ80T11 461 aa9.51□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Foxp1P58462 705 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 BC051142Q3V0M8 400 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Dnajc8Q6NZB0 253 aaKnown RBP9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Cep104Q80V31 926 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Pih1h3bQ8C6P5 218 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 KynuQ9CXF0 464 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ehd4Q9EQP2 541 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Strn3Q9ERG2 796 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 DexiQ9WUQ7 95 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Rrbp1Q99PL5 1605 aaKnown RBP9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Cep170bQ80U49 1574 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Cdr2lA2A6T1 465 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Man1a2P39098 641 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 NyxP83503 476 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Rabep2Q91WG2 554 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Aldh18a1Q9Z110 795 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 1810065E05RikQ5NC41 235 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Cdc37Q61081 379 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Trex1Q91XB0 314 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Fuca2Q99KR8 461 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Mei1Q9D4I2 1268 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ccdc88cQ6VGS5 2009 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Iqcj-Schip1A0A088MLT8 559 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Mtco1P00397 514 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Schip1P0DPB4 484 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Slc8a1P70414 970 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Nek9Q8K1R7 984 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 P2rx5Q3UYI1 455 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Sh2b1Q91ZM2 756 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Psmd14O35593 310 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ttf2Q5NC05 1138 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Samhd1Q60710 627 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Cep85Q8BMK0 761 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Neto2Q8BNJ6 525 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Zcchc17Q9ESX4 241 aaKnown RBP9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ccnyl1D3YUJ3 367 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Slc4a1P04919 929 aa9.5□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Gm5483B2RV77 97 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 RcvrnP34057 202 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Nkx2-3P97334 362 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Fkbp3Q62446 224 aaKnown RBP9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Zcchc8Q9CYA6 709 aaKnown RBP9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Lmntd2Q0VET5 664 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Parp10Q8CIE4 960 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Mrgprx1Q8CIP3 322 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 LgsnQ8CIX8 563 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Zmat2Q9CPW7 199 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Dnaaf1Q9D2H9 634 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Zfyve19Q9DAZ9 389 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Gm7168A0AUV4 508 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ctdnep1Q3TP92 244 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Rnf207Q3V3A7 635 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms