RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Fem1bQ9Z2G0 627 aa25.5■■□□□ 1.67
Cln6-201ENSMUST00000034776 Gm1993A6X8I0 212 aa25.49■■□□□ 1.67
Cln6-201ENSMUST00000034776 Cnbd1B1AWM0 430 aa25.49■■□□□ 1.67
Cln6-201ENSMUST00000034776 SlxD3Z347 212 aa25.49■■□□□ 1.67
Cln6-201ENSMUST00000034776 Slc25a38Q91XD8 326 aa25.49■■□□□ 1.67
Cln6-201ENSMUST00000034776 Ppp1r9aH3BJD6 1292 aa25.49■■□□□ 1.67
Cln6-201ENSMUST00000034776 YdjcQ14BV6 310 aa25.49■■□□□ 1.67
Cln6-201ENSMUST00000034776 Krt74Q6IFZ9 495 aa25.49■■□□□ 1.67
Cln6-201ENSMUST00000034776 Slc17a8Q8BFU8 601 aa25.49■■□□□ 1.67
Cln6-201ENSMUST00000034776 Gjd4Q8BSD4 364 aa25.49■■□□□ 1.67
Cln6-201ENSMUST00000034776 Rcor2Q8C796 523 aa25.49■■□□□ 1.67
Cln6-201ENSMUST00000034776 Nemp2Q8CB65 421 aa25.49■■□□□ 1.67
Cln6-201ENSMUST00000034776 Eef1gQ9D8N0 437 aaKnown RBP25.49■■□□□ 1.67
Cln6-201ENSMUST00000034776 SetQ9EQU5 289 aaKnown RBP25.49■■□□□ 1.67
Cln6-201ENSMUST00000034776 RaraP11416 462 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Gng11P61953 73 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Lrch1P62046 709 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Gas7Q60780 421 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Ttc26Q8BS45 554 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Spata4Q8K3V1 295 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Serpinb3bQ9D1Q5 387 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 PpihQ9D868 188 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Phtf1Q9QZ09 761 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Flot1O08917 428 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Erbb2P70424 1256 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Pbxip1Q3TVI8 727 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Pgrmc2Q80UU9 217 aaKnown RBP25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Ankrd24Q80VM7 985 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Bri3bpQ8BXV2 253 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Trim47Q8C0E3 641 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Stap2Q8R0L1 411 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Kif17Q99PW8 1038 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Fam217aQ9D9W6 419 aa25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Mrvi1Q9WUX5 899 aaKnown RBP25.48■■□□□ 1.67
Cln6-201ENSMUST00000034776 Fam205aA2APU8 1308 aa25.47■■□□□ 1.67
Cln6-201ENSMUST00000034776 Spocd1B1ASB6 936 aa25.47■■□□□ 1.67
Cln6-201ENSMUST00000034776 Vmn2r78K7N6U5 853 aa25.47■■□□□ 1.67
Cln6-201ENSMUST00000034776 Lig1P37913 916 aa25.47■■□□□ 1.67
Cln6-201ENSMUST00000034776 Rad23aP54726 363 aa25.47■■□□□ 1.67
Cln6-201ENSMUST00000034776 Map4k1P70218 827 aa25.47■■□□□ 1.67
Cln6-201ENSMUST00000034776 Ccdc113Q8C5T8 377 aa25.47■■□□□ 1.67
Cln6-201ENSMUST00000034776 Phldb2Q8K1N2 1249 aa25.47■■□□□ 1.67
Cln6-201ENSMUST00000034776 Usp14Q9JMA1 493 aaKnown RBP25.47■■□□□ 1.67
Cln6-201ENSMUST00000034776 Ercc4Q9QZD4 917 aa25.47■■□□□ 1.67
Cln6-201ENSMUST00000034776 Pdcd6ipQ9WU78 869 aaKnown RBP25.47■■□□□ 1.67
Cln6-201ENSMUST00000034776 Smchd1Q6P5D8 2007 aaKnown RBP25.47■■□□□ 1.67
Cln6-201ENSMUST00000034776 EregQ61521 162 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Secisbp2lQ6A098 1086 aaKnown RBP25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 March6Q6ZQ89 909 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Zfp397Q7TNK4 527 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Dclk3Q8BWQ5 790 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Bbs7Q8K2G4 715 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 DaglbQ91WC9 669 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Gm38392E9Q2A2 434 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Fgl2P12804 432 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Hoxc13P50207 328 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Epb41l4aP52963 686 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Trak2Q6P9N8 913 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Zfp251Q6PCX8 632 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Rhbdf1Q6PIX5 856 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 NkrfQ8BY02 690 aaKnown RBP25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 GanQ8CA72 597 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Smtnl1Q99LM3 459 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 CoasyQ9DBL7 563 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Map3k20Q9ESL4 802 aaKnown RBP25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 SisF8VQM5 1818 aa25.46■■□□□ 1.67
Cln6-201ENSMUST00000034776 Zfp984A2A7A2 547 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Serpina1aP07758 413 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 L1camP11627 1260 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Serpina1bP22599 413 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Rit2P70425 217 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Serpina1cQ00896 412 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Serpina1dQ00897 413 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Fdxacb1Q3UY23 622 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Tpm4Q6IRU2 248 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Tmem132dQ76HP3 1097 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Fsip1Q9D3V5 435 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 SerhlQ9EPB5 311 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 FignQ9ERZ6 759 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Cntnap5cQ0V8T7 1305 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Itgb5O70309 798 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Epha7Q61772 998 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Naa35Q6PHQ8 725 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 PodnQ7TQ62 611 aa25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Pym1Q8CHP5 203 aaKnown RBP25.45■■□□□ 1.66
Cln6-201ENSMUST00000034776 Tfe3Q64092 572 aaKnown RBP25.44■■□□□ 1.66
Cln6-201ENSMUST00000034776 Nipa1Q8BHK1 323 aa25.44■■□□□ 1.66
Cln6-201ENSMUST00000034776 Mrps5Q99N87 432 aaKnown RBP25.44■■□□□ 1.66
Cln6-201ENSMUST00000034776 Ears2Q9CXJ1 523 aa25.44■■□□□ 1.66
Cln6-201ENSMUST00000034776 Lrp2bpQ9D4C6 346 aa25.44■■□□□ 1.66
Cln6-201ENSMUST00000034776 B3galt4Q9Z0F0 371 aa25.44■■□□□ 1.66
Cln6-201ENSMUST00000034776 Scgb2b11A0A087WR49 112 aa25.43■■□□□ 1.66
Cln6-201ENSMUST00000034776 CfhP06909 1234 aa25.43■■□□□ 1.66
Cln6-201ENSMUST00000034776 PtpraP18052 829 aa25.43■■□□□ 1.66
Cln6-201ENSMUST00000034776 Scarf1Q5ND28 820 aa25.43■■□□□ 1.66
Cln6-201ENSMUST00000034776 Stard7Q8R1R3 373 aa25.43■■□□□ 1.66
Cln6-201ENSMUST00000034776 Med24Q99K74 987 aa25.43■■□□□ 1.66
Cln6-201ENSMUST00000034776 Pstpip2Q99M15 334 aa25.43■■□□□ 1.66
Cln6-201ENSMUST00000034776 Kcnh7Q9ER47 1195 aa25.43■■□□□ 1.66
Cln6-201ENSMUST00000034776 Scn10aQ6QIY3 1958 aa25.43■■□□□ 1.66
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms