RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 PdhbQ9D051 359 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Gstt4Q9D4P7 240 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Mrps9Q9D7N3 390 aaKnown RBP10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Pdha1P35486 390 aaKnown RBP10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 TwistnbQ78WZ7 330 aaKnown RBP10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Kat14Q8CID0 779 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Nsun2Q1HFZ0 757 aaKnown RBP10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Pdik1lQ8QZR7 341 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Pip4k2cQ91XU3 421 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 P2rx7Q9Z1M0 595 aa10.95□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Cul4bA2A432 970 aaKnown RBP10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Bbs9Q811G0 885 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Rbm31yQ9D3U4 565 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Tulp4Q9JIL5 1547 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Prpf38aQ4FK66 312 aaKnown RBP10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Heatr3Q8BQM4 679 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Trpm8Q8R4D5 1104 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Trim16Q99PP9 556 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Snx24Q9CRB0 169 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Thap2Q9D305 217 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Adam1aQ60813 791 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Rab3ipQ68EF0 428 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 SrlQ7TQ48 910 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Bpifb6Q8BU51 449 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Tmem134Q8R0J4 195 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Setd3Q91WC0 594 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 MlxiplQ99MZ3 864 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Pold4Q9CWP8 107 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 TbcbQ9D1E6 244 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Tekt1Q9DAJ2 418 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Oxr1Q4KMM3 866 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Arl13bQ640N2 427 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Stap2Q8R0L1 411 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Tspan17Q9D7W4 270 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Krt24A1L317 512 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 P4hbP09103 509 aaKnown RBP10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ftl1P29391 183 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Nlrp4aQ8BU40 982 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Rapgef5Q8C0Q9 814 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Nr2e3Q9QXZ7 395 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Eno1P17182 434 aaKnown RBP10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Hnrnph2P70333 449 aaKnown RBP10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Dpcr1Q3TNW5 500 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Frmd8Q3UFK8 466 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Rnf10Q3UIW5 804 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Mpp4Q6P7F1 635 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Serpinb3dQ6UKZ0 387 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Mb21d2Q8C525 428 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 NemfQ8CCP0 1064 aaKnown RBP10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 St13Q99L47 371 aaKnown RBP10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Sgk1Q9WVC6 431 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Zscan12Q9Z1D7 501 aa10.94□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Xbp1O35426 267 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Kcnb1Q03717 857 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Asic4Q7TNS7 539 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ccdc169Q8BXX9 214 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Q8C1R3 189 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Afg3l1Q920A7 789 aaKnown RBP10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Angptl2Q9R045 493 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Rnf123Q5XPI3 1314 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Gm1141B9EJU1 475 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 ItgadQ3V0T4 1168 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ehd2Q8BH64 543 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ddx25Q9QY15 484 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Vti1aO89116 217 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Hddc2Q3SXD3 199 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Miga1Q4QQM5 600 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ncoa5Q91W39 579 aaKnown RBP10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Gfpt2Q9Z2Z9 682 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Kif1bQ60575 1816 aaKnown RBP10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Stx1bP61264 288 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Cyfip2Q5SQX6 1253 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Gm38392E9Q2A2 434 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Mcl1P97287 331 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 1700013D24RikQ0P521 120 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ncoa4Q5U4H9 625 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Q922C1 641 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Dhx58Q99J87 678 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Crlf3Q9Z2L7 442 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Krt1P04104 637 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Lsg1Q3UM18 644 aaKnown RBP10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 OcrlQ6NVF0 900 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 CntrobQ8CB62 887 aa10.93□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Apol7eQ3UZ24 369 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 AlcamQ61490 583 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Itih1Q61702 907 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Dennd2cQ6P9P8 914 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Xpo6Q924Z6 1125 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Krt34Q9D646 392 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Vmn2r78K7N6U5 853 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Stag2O35638 1231 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Tmprss11aQ3UQ41 389 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Lrrn2Q6PHP6 730 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Krt75Q8BGZ7 551 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Cep85Q8BMK0 761 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Tsen34Q8BMZ5 316 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ccdc92Q8VDN4 314 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Nek8Q91ZR4 698 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Plekhg2Q6KAU7 1340 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ccdc62E9PVD1 701 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms