RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Col4a5Q63ZW6 1691 aa20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Trim43cP86449 446 aa20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 HmmrQ00547 794 aaKnown RBP20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Qrich1Q3UA37 777 aa20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Sco1Q5SUC9 284 aa20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Akap4Q60662 849 aa20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Cog5Q8C0L8 829 aa20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Spata16Q8C636 571 aa20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ccdc89Q9DA73 370 aa20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Btbd18A0A0A6YY25 723 aa20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Tcp1P11983 556 aaKnown RBP20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Gjc1P28229 396 aa20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Map3k12Q60700 888 aa20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ccdc189Q6NZQ0 333 aa20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ppp2r3dQ9Z176 491 aa20.26■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Odf2A3KGV1 830 aaKnown RBP20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 4930523C07RikE9Q2T4 99 aa20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 P4hbP09103 509 aaKnown RBP20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 PltpP55065 493 aa20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Nlrp2Q4PLS0 1046 aaKnown RBP20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 PpanQ91YU8 470 aaKnown RBP20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ccdc88cQ6VGS5 2009 aa20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Vmn2r79E9Q067 851 aa20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 ChkbO55229 394 aa20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Hspa1lP16627 641 aa20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Tcerg1lQ3B807 590 aa20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Tnfaip8l3Q3TBL6 204 aa20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ccdc148Q6P5U8 527 aa20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Psmd2Q8VDM4 908 aa20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ribc1Q9D0B8 379 aa20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Cwc15Q9JHS9 229 aaKnown RBP20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Vav3Q9R0C8 847 aa20.25■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Gm1758F6VZZ1 202 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 AurkbO70126 345 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Pde1cQ64338 706 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 March6Q6ZQ89 909 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Taok3Q8BYC6 898 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Bhmt2Q91WS4 363 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Xrcc4Q924T3 326 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Spata17Q9D552 379 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Adgrf5G5E8Q8 1348 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 E9QMW4 1145 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Gna15P30678 374 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Stat4P42228 749 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Gjb6P70689 261 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Muc3aQ3U5A2 218 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Lrrc36Q3V0M2 755 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ccdc157Q5SPX1 718 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Tbc1d9bQ5SVR0 1263 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Krt14Q61781 484 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Krt74Q6IFZ9 495 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Slc20a2Q80UP8 656 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Atxn7Q8R4I1 867 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Smtnl1Q99LM3 459 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Sertad2Q9JJG5 309 aa20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Prpf40aQ9R1C7 953 aaKnown RBP20.24■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ces1aE9PYP1 563 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Kcnh2O35219 1162 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Mettl14Q3UIK4 456 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ncapg2Q6DFV1 1138 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Stx17Q9D0I4 301 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 BcamQ9R069 622 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Col5a2Q3U962 1497 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 1700016G14RikA0A286YCZ6 238 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ttc38A3KMP2 465 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Meis2P97367 477 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Rbm26Q6NZN0 1012 aaKnown RBP20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 SugctQ7TNE1 436 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ttc7aQ8BGB2 858 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 GzmnQ920S1 248 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ddah1Q9CWS0 285 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 EmcnQ9R0H2 261 aa20.23■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 AoahO35298 574 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Rbm46P86049 533 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ddx3xQ62167 662 aaKnown RBP20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Sh3gl2Q62420 352 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Chtf18Q8BIW9 969 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Spata2Q8K004 515 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 St5Q924W7 1134 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Zcrb1Q9CZ96 217 aaKnown RBP20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Slc26a4Q9R155 780 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 DexiQ9WUQ7 95 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Nr2f2P43135 414 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Serpinb6dQ3UWK8 375 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Gm5169Q5M8P2 212 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Drd5Q8BLD9 478 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 MypopQ8R4U1 393 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Yipf1Q91VU1 306 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Erp44Q9D1Q6 406 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Ddx25Q9QY15 484 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Scgb2b12S4R2L0 112 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Myh14Q6URW6 2000 aa20.22■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 EporP14753 507 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Rasip1Q3U0S6 961 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Hdhd2Q3UGR5 259 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Best3Q6H1V1 669 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Trim6Q8BGE7 488 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 AagabQ8R2R3 316 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Erlin1Q91X78 346 aa20.21■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Rexo2Q9D8S4 237 aa20.21■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms