RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Col3a1P08121 1464 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Cyp2j7A0A140T8U1 504 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Nmt2O70311 529 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Xirp1O70373 1129 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Becn2P0DM65 447 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Cnnm2Q3TWN3 875 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Git1Q68FF6 770 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Krt74Q6IFZ9 495 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Ankrd13dQ6PD24 605 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Ccp110Q7TSH4 1004 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Slc12a6Q924N4 1150 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Mphosph6Q9D1Q1 161 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Polr2dQ9D7M8 142 aaKnown RBP12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Gsdmdc1Q9D8T2 487 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Casp12O08736 419 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Npy5rO70342 466 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Stx8O88983 236 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Tp53P02340 387 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Cd3dP04235 173 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Gna14P30677 355 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Usp46P62069 366 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 CyldQ80TQ2 952 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Lgi2Q8K4Z0 550 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Pramef12Q9D2F1 463 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Nop56Q9D6Z1 580 aaKnown RBP12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 MefvQ9JJ26 767 aa12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Znfx1Q8R151 1909 aaKnown RBP12.58□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Frmd7A2AD83 703 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Klhl41A2AUC9 606 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Tcp10bE9PYJ0 438 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Zc3h7bF8VPP8 982 aaKnown RBP12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Il7P10168 154 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Oprl1P35377 367 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Pbx1P41778 430 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Rtkn2Q14B46 604 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 P3h1Q3V1T4 739 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Asap3Q5U464 904 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Exoc3Q6KAR6 755 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Txndc16Q7TN22 820 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Parp10Q8CIE4 960 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Mmgt1Q8K273 131 aaKnown RBP12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Bzw2Q91VK1 419 aaKnown RBP12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 GatbQ99JT1 557 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Wdr46Q9Z0H1 622 aaKnown RBP12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Marf1Q8BJ34 1730 aaKnown RBP12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Fer1l6E0CZ42 1862 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Greb1lB9EJV3 1913 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Fam81bA0A140LI28 432 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Rab21P35282 222 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Gnat2P50149 354 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 MagohP61327 146 aaKnown RBP12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Nlrp2Q4PLS0 1046 aaKnown RBP12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Slc51bQ80WK2 128 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Apol10aQ8CCA5 318 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Ubac1Q8VDI7 409 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 MagohbQ9CQL1 146 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Akt1s1Q9D1F4 257 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Pdcd7Q9WTY1 482 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Gfpt2Q9Z2Z9 682 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Ttc30a2A2AKQ8 664 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 OatP29758 439 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Ephb2P54763 986 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Rhbdl3P58873 404 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 NfixP70257 488 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Pex1Q5BL07 1284 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Klhl29Q80T74 875 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Terb1Q8C0V1 768 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Znf131Q8K3J5 619 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Ttc30a1Q99J38 664 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Ttc30bQ9CY00 664 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Uso1Q9Z1Z0 959 aaKnown RBP12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Serpinb6cW4VSP4 379 aa12.57□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Myh7bA2AQP0 1941 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Naaladl2A0A0N4SUJ3 795 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Prr16A3KMN5 304 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Abi2P62484 446 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Rasa3Q60790 834 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Zbtb17Q60821 794 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Ddx3yQ62095 658 aaKnown RBP12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Zic5Q7TQ40 622 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Olfr118Q7TRJ6 321 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Rnf41Q8BH75 317 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 NcaldQ91X97 193 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Psmd6Q99JI4 389 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Arfgap2Q99K28 520 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Etnk1Q9D4V0 363 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 3830403N18RikQ9D6C3 208 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Cnpy3Q9DAU1 276 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Scgb2b21A0A087WQA9 112 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Gdap1O88741 358 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Ect2Q07139 913 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Ankrd13cQ3UX43 541 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Slc44a1Q6X893 653 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Zfp438Q8BFX2 798 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Rasal3Q8C2K5 1041 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Myl6bQ8CI43 207 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Sf3b3Q921M3 1217 aaKnown RBP12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Zmynd10Q99ML0 440 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Wdr64Q9D565 1086 aa12.56□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Gys1Q9Z1E4 738 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms