RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Fxr2Q9WVR4 673 aaKnown RBP13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Scgb2b12S4R2L0 112 aa13.2□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cetn3O35648 167 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Psg29Q3URN6 468 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Kif22Q3V300 660 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cacna2d4Q5RJF7 1116 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Specc1Q5SXY1 1067 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Usp38Q8BW70 1042 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Bbs7Q8K2G4 715 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cacnb1Q8R3Z5 597 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 PdhbQ9D051 359 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Zfyve9A2A8R0 1397 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Mboat4P0C7A3 435 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Msh3P13705 1091 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 VimP20152 466 aaKnown RBP13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ap1m1P35585 423 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 AdkP55264 361 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Setd4P58467 439 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Asap3Q5U464 904 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Trpc6Q61143 930 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Fermt3Q8K1B8 665 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Mrpl12Q9DB15 201 aaKnown RBP13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 DexiQ9WUQ7 95 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Nme9A0A1L1SUL6 329 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Pgrmc1O55022 195 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 DnttP09838 530 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Kremen1Q99N43 473 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Lztr1Q9CQ33 837 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Klra10Q9R1G6 266 aa13.19□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cd44P15379 778 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Oxr1Q4KMM3 866 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Kctd16Q5DTY9 427 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cd37Q61470 281 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Kcnj11Q61743 390 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Krt14Q61781 484 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Pip5kl1Q6U7H8 395 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Znf526Q8BI66 675 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 E330017A01RikQ8BU47 192 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Csgalnact2Q8C1F4 542 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Nup58Q8R332 587 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Prpf4Q9DAW6 521 aaKnown RBP13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Trim10Q9WUH5 489 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Duox1A2AQ92 1551 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Armc3A2AU72 881 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Mroh9G5E8L9 891 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Vmn2r78K7N6U5 853 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Eif6O55135 245 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Rnaseh1O70338 285 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Gdap1O88741 358 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Akr1b1P45376 316 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Mcl1P97287 331 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Wdr70Q3TWF6 657 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Lrig2Q52KR2 1054 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ttc7aQ8BGB2 858 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 4930550L24RikQ99PA7 320 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cul1Q9WTX6 776 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ccdc88aQ5SNZ0 1873 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Sept2P42208 361 aaKnown RBP13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Fam183bQ5NC57 135 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ces1eQ64176 562 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Pwp2Q8BU03 919 aaKnown RBP13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Mettl13Q91YR5 698 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Golph3Q9CRA5 298 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Dydc2Q9D3X8 139 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Sept14Q9DA97 430 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Sh2b2Q9JID9 621 aa13.18□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Dcaf17Q3TUL7 519 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Rapgef1Q3UHC1 1224 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cracr2aQ3UP38 310 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Tktl2Q9D4D4 627 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Map3k15A2AQW0 1331 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 A0A286YCQ6 122 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Fbf1A2A870 1173 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 A430078G23RikE9Q7Y4 484 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Hspa9P38647 679 aaKnown RBP13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Dpcr1Q3TNW5 500 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Dhx37Q6NZL1 1150 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cnot10Q8BH15 744 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Dusp19Q8K4T5 220 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 NapaQ9DB05 295 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ddx25Q9QY15 484 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Zfp408H7BX78 710 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Eftud2O08810 971 aaKnown RBP13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Serpina1bP22599 413 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Usp4P35123 962 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Lrrc43Q3V0L5 667 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 SugctQ7TNE1 436 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Fam228aQ8CDW1 299 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Lgi2Q8K4Z0 550 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Hps4Q99KG7 671 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ddah1Q9CWS0 285 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Akap8Q9DBR0 687 aaKnown RBP13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Cyb5rlB1AS42 316 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Vmn2r79E9Q067 851 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Ercc5P35689 1170 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Nlrp2Q4PLS0 1046 aaKnown RBP13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Serpinb6Q60854 378 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Bsdc1Q80Y55 427 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 Psma8Q9CWH6 250 aa13.17□□□□□ -0.3
Rfx1-201ENSMUST00000005600 ArpinQ9D0A3 226 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms