RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Fgd4Q91ZT5 766 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Adarb2Q9JI20 745 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Abcc2Q8VI47 1543 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Nlrp1bA1Z198 1177 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ptk2P34152 1090 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 RenbpP82343 430 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Trim62Q80V85 475 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Cdca7lQ922M5 438 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Nrbp1Q99J45 535 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 IydQ9DCX8 285 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ggps1Q9WTN0 300 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Hdac6Q9Z2V5 1149 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 NpatQ8BMA5 1420 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Tcof1O08784 1320 aaKnown RBP9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Nlrp4fQ66X05 959 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Dhx37Q6NZL1 1150 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Letm2Q7TNU7 480 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Dpp8Q80YA7 892 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Bbs9Q811G0 885 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Vps39Q8R5L3 886 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Med15Q924H2 789 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Rbm31yQ9D3U4 565 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Anxa9Q9JHQ0 345 aa9.86□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 1700011I03RikE9PYL8 271 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gm3415J3QMS8 315 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Art2aP17981 287 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Sox5P35710 763 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Trim38Q5SZ99 471 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Stambpl1Q76N33 436 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Krt75Q8BGZ7 551 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Adprhl2Q8CG72 370 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gps1Q99LD4 471 aaKnown RBP9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gm3404Q9D506 307 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Tjap1Q9DCD5 539 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Tfap4Q9JIZ5 338 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Hyou1Q9JKR6 999 aaKnown RBP9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gadd45gQ9Z111 159 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gli2Q0VGT2 1544 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gm5580A0A0N4SVP8 411 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Gm29133A0A1B0GT72 266 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Pagr1bF6V0H0 108 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Stam2O88811 523 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Sesn2P58043 480 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ces5aQ6AW46 575 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 RimklbQ80WS1 387 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Dnm3Q8BZ98 863 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Slain2Q8CI08 581 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Pagr1aQ99L02 253 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ska2Q9CR46 120 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Wars2Q9CYK1 360 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Clic4Q9QYB1 253 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Vstm4T1NXB5 319 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Scaf11E9PZM7 1456 aaKnown RBP9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ccdc62E9PVD1 701 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Orc4O88708 433 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ovgp1Q62010 721 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 GmipQ6PGG2 971 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ttll4Q80UG8 1193 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Abi1Q8CBW3 481 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Rhobtb1Q9DAK3 695 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Krt78E9Q0F0 1068 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Pcif1P59114 706 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Scg2Q03517 617 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Upf3bQ3ULL6 472 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Lrch2Q3UMG5 773 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Tmcc1Q69ZZ6 649 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Snx19Q6P4T1 997 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Dis3l2Q8CI75 870 aaKnown RBP9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Spire2Q8K1S6 718 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Mageb16Q9CWV4 363 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ehd4Q9EQP2 541 aa9.85□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 UrgcpQ5NCI0 926 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 CpQ61147 1061 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ifit1Q64282 463 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ppp1r12bQ8BG95 976 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Clic6Q8BHB9 596 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Spata21Q8BHW6 681 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Fra10ac1Q8BP78 315 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Plcb4Q91UZ1 1175 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Paip2bQ91W45 136 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Fam84aQ9D650 292 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Rmdn1Q9DCV4 305 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Zranb2Q9R020 330 aaKnown RBP9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Pdcd7Q9WTY1 482 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Apobec2Q9WV35 224 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Nova2D3YVV7 556 aaKnown RBP9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 DnttP09838 530 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Tac1P41539 130 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Q3TQQ9 903 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ankrd13cQ3UX43 541 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Caprin1Q60865 707 aaKnown RBP9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 C2cd5Q7TPS5 1016 aaKnown RBP9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Lca5Q80ST9 704 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 CcnyQ8BGU5 341 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Tigd4Q8BUZ3 513 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Washc5Q8C2E7 1159 aaKnown RBP9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ccdc159Q8C963 411 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Eif4a3Q91VC3 411 aaKnown RBP9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Pip4k2cQ91XU3 421 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Cdc26Q99JP4 85 aa9.84□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms