RNA–Protein interactions for RNA: YMR235C

RNA1, Transcript of GTPase activating protein (GAP) for Gsp1p, yeast

Gene RNA1, Length 1,224 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNA1	YMR235C	YKL023W	P36103	277 aa	Known RBP	4.09	□□□□□ -1.75
RNA1	YMR235C	DUG2	P38149	878 aa		4.09	□□□□□ -1.75
RNA1	YMR235C	RRN10	P38204	145 aa		4.09	□□□□□ -1.75
RNA1	YMR235C	CTM1	P38818	585 aa		4.09	□□□□□ -1.75
RNA1	YMR235C	MNL1	P38888	796 aa		4.09	□□□□□ -1.75
RNA1	YMR235C	IAH1	P41734	238 aa		4.09	□□□□□ -1.75
RNA1	YMR235C	LIA1	P47120	325 aa	Known RBP	4.09	□□□□□ -1.75
RNA1	YMR235C	DRN1	P53255	507 aa	Known RBP	4.09	□□□□□ -1.75
RNA1	YMR235C	SMA1	Q02651	245 aa		4.09	□□□□□ -1.75
RNA1	YMR235C	SPO19	Q03029	223 aa		4.09	□□□□□ -1.75
RNA1	YMR235C	SEG1	Q04279	960 aa		4.09	□□□□□ -1.75
RNA1	YMR235C	ATG26	Q06321	1198 aa		4.09	□□□□□ -1.75
RNA1	YMR235C	MCP2	Q06567	569 aa		4.09	□□□□□ -1.75
RNA1	YMR235C	GPA1	P08539	472 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	ERG11	P10614	530 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	GAL3	P13045	520 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	NUP1	P20676	1076 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	TKL1	P23254	680 aa	Known RBP	4.08	□□□□□ -1.76
RNA1	YMR235C	ATP11	P32453	318 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	ECM25	P32525	599 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
RNA1	YMR235C	MSN2	P33748	704 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	SOR1	P35497	357 aa	Known RBP	4.08	□□□□□ -1.76
RNA1	YMR235C	TPO5	P36029	618 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	BNA4	P38169	460 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	TCM62	P38228	572 aa	Known RBP	4.08	□□□□□ -1.76
RNA1	YMR235C	TIF5	P38431	405 aa	Known RBP	4.08	□□□□□ -1.76
RNA1	YMR235C	BZZ1	P38822	633 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	CCT2	P39076	527 aa	Known RBP	4.08	□□□□□ -1.76
RNA1	YMR235C	AIM20	P40451	204 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	SNG1	P46950	547 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	LSB1	P53281	241 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	LSC1	P53598	329 aa	Known RBP	4.08	□□□□□ -1.76
RNA1	YMR235C	YDL057W	Q07379	328 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	SOR2	Q07786	357 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	NSE1	Q07913	336 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	YAP7	Q08182	245 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	YLR049C	Q12110	428 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
RNA1	YMR235C	LDB17	Q12342	491 aa		4.08	□□□□□ -1.76
RNA1	YMR235C	THR4	P16120	514 aa	Known RBP	4.07	□□□□□ -1.76
RNA1	YMR235C	TYR1	P20049	452 aa		4.07	□□□□□ -1.76
RNA1	YMR235C	TMT1	P32643	299 aa		4.07	□□□□□ -1.76
RNA1	YMR235C	REC114	P32841	428 aa		4.07	□□□□□ -1.76
RNA1	YMR235C	YBL028C	P38202	106 aa		4.07	□□□□□ -1.76
RNA1	YMR235C	KAP104	P38217	918 aa	Known RBP	4.07	□□□□□ -1.76
RNA1	YMR235C	UBA4	P38820	440 aa		4.07	□□□□□ -1.76
RNA1	YMR235C	GAT2	P40209	560 aa		4.07	□□□□□ -1.76
RNA1	YMR235C	PAC11	P40960	533 aa		4.07	□□□□□ -1.76
RNA1	YMR235C	PNC1	P53184	216 aa	Known RBP	4.07	□□□□□ -1.76
RNA1	YMR235C	SNU56	Q03782	492 aa	Known RBP	4.07	□□□□□ -1.76
RNA1	YMR235C	ERV41	Q04651	352 aa		4.07	□□□□□ -1.76
RNA1	YMR235C	RRG8	Q06109	277 aa		4.07	□□□□□ -1.76
RNA1	YMR235C	OSW1	Q08692	278 aa		4.07	□□□□□ -1.76
RNA1	YMR235C	SSA3	P09435	649 aa	Known RBP	4.06	□□□□□ -1.76
RNA1	YMR235C	UGA1	P17649	471 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	HMX1	P32339	317 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	PRP21	P32524	280 aa	Predicted RBP	4.06	□□□□□ -1.76
RNA1	YMR235C	MRP4	P32902	394 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	YKL070W	P36087	169 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	QDR3	P38227	689 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	SWC5	P38326	303 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	ERG7	P38604	731 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	DED81	P38707	554 aa	Known RBP	4.06	□□□□□ -1.76
RNA1	YMR235C	YHR122W	P38829	231 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	SPC97	P38863	823 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	ERV46	P39727	415 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	YPS6	P40583	537 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	SPG5	P42933	373 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	TAX4	P47030	604 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	YJR011C	P47086	261 aa	Predicted RBP	4.06	□□□□□ -1.76
RNA1	YMR235C	GTO1	P48239	356 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	ASN1	P49089	572 aa	Known RBP	4.06	□□□□□ -1.76
RNA1	YMR235C	PIB2	P53191	635 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	MPP6	P53725	186 aa	Predicted RBP	4.06	□□□□□ -1.76
RNA1	YMR235C	DBP6	P53734	629 aa	Known RBP	4.06	□□□□□ -1.76
RNA1	YMR235C	ASI1	P54074	624 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	STD1	Q02794	444 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	RIM13	Q03792	727 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	CSI1	Q04368	295 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	YPR078C	Q06813	372 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	RDR1	Q08904	546 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	LSP1	Q12230	341 aa	Known RBP	4.06	□□□□□ -1.76
RNA1	YMR235C	YOR012W	Q12351	137 aa		4.06	□□□□□ -1.76
RNA1	YMR235C	SEC3	P33332	1336 aa	Known RBP	4.05	□□□□□ -1.76
RNA1	YMR235C	YER145C-A	A0A023PYF4	145 aa		4.05	□□□□□ -1.76
RNA1	YMR235C	STE2	D6VTK4	431 aa		4.05	□□□□□ -1.76
RNA1	YMR235C	YPR089W	O13585	888 aa		4.05	□□□□□ -1.76
RNA1	YMR235C	RAD52	P06778	471 aa	Known RBP	4.05	□□□□□ -1.76
RNA1	YMR235C	NFT1	P0CE68	1218 aa		4.05	□□□□□ -1.76
RNA1	YMR235C	UNG1	P12887	359 aa		4.05	□□□□□ -1.76
RNA1	YMR235C	MSS116	P15424	664 aa	Known RBP	4.05	□□□□□ -1.76
RNA1	YMR235C	YSC83	P32792	385 aa		4.05	□□□□□ -1.76
RNA1	YMR235C	COT1	P32798	439 aa		4.05	□□□□□ -1.76
RNA1	YMR235C	RPC34	P32910	317 aa		4.05	□□□□□ -1.76
RNA1	YMR235C	PTK1	P36002	662 aa	Predicted RBP	4.05	□□□□□ -1.76
RNA1	YMR235C	MRPL37	P36532	105 aa		4.05	□□□□□ -1.76
RNA1	YMR235C	INM1	P38710	295 aa		4.05	□□□□□ -1.76
RNA1	YMR235C	RRP4	P38792	359 aa	Known RBP	4.05	□□□□□ -1.76
RNA1	YMR235C	PET100	P38958	111 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms