RNA–Protein interactions for RNA: YLR351C

NIT3, Transcript of Nit protein, yeast

Gene NIT3, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	YLR351C	TUL1	P36096	758 aa		4.15	□□□□□ -1.75
NIT3	YLR351C	FAU1	P40099	211 aa		4.15	□□□□□ -1.75
NIT3	YLR351C	SSU1	P41930	458 aa		4.15	□□□□□ -1.75
NIT3	YLR351C	CRZ1	P53968	678 aa		4.15	□□□□□ -1.75
NIT3	YLR351C	SOV1	Q04748	898 aa		4.15	□□□□□ -1.75
NIT3	YLR351C	YMR317W	Q04893	1140 aa		4.15	□□□□□ -1.75
NIT3	YLR351C	LEU4	P06208	619 aa	Known RBP	4.14	□□□□□ -1.75
NIT3	YLR351C	GPH1	P06738	902 aa	Known RBP	4.14	□□□□□ -1.75
NIT3	YLR351C	ATP10	P18496	279 aa		4.14	□□□□□ -1.75
NIT3	YLR351C	YCR051W	P25631	222 aa		4.14	□□□□□ -1.75
NIT3	YLR351C	BUB3	P26449	341 aa		4.14	□□□□□ -1.75
NIT3	YLR351C	RML2	P32611	393 aa		4.14	□□□□□ -1.75
NIT3	YLR351C	REC114	P32841	428 aa		4.14	□□□□□ -1.75
NIT3	YLR351C	THI2	P38141	450 aa		4.14	□□□□□ -1.75
NIT3	YLR351C	MEP2	P41948	499 aa		4.14	□□□□□ -1.75
NIT3	YLR351C	ELP2	P42935	788 aa		4.14	□□□□□ -1.75
NIT3	YLR351C	RTT101	P47050	842 aa		4.14	□□□□□ -1.75
NIT3	YLR351C	FMS1	P50264	508 aa		4.14	□□□□□ -1.75
NIT3	YLR351C	ERP1	Q05359	219 aa	Known RBP	4.14	□□□□□ -1.75
NIT3	YLR351C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
NIT3	YLR351C	VMR1	P38735	1592 aa		4.14	□□□□□ -1.75
NIT3	YLR351C	PDR11	P40550	1411 aa		4.13	□□□□□ -1.75
NIT3	YLR351C	CYB2	P00175	591 aa		4.13	□□□□□ -1.75
NIT3	YLR351C	RPL15A	P05748	204 aa	Known RBP	4.13	□□□□□ -1.75
NIT3	YLR351C	RPC53	P25441	422 aa		4.13	□□□□□ -1.75
NIT3	YLR351C	YUR1	P26725	428 aa		4.13	□□□□□ -1.75
NIT3	YLR351C	YIM1	P28625	365 aa		4.13	□□□□□ -1.75
NIT3	YLR351C	SPC110	P32380	944 aa		4.13	□□□□□ -1.75
NIT3	YLR351C	TFG2	P41896	400 aa	Predicted RBP	4.13	□□□□□ -1.75
NIT3	YLR351C	NCS2	P53923	493 aa	Predicted RBP	4.13	□□□□□ -1.75
NIT3	YLR351C	RKM5	Q12367	367 aa		4.13	□□□□□ -1.75
NIT3	YLR351C	IML1	P47170	1584 aa		4.13	□□□□□ -1.75
NIT3	YLR351C	YRF1-4	O13559	1382 aa		4.13	□□□□□ -1.75
NIT3	YLR351C	ADK2	P26364	225 aa		4.12	□□□□□ -1.75
NIT3	YLR351C	PRO3	P32263	286 aa	Known RBP	4.12	□□□□□ -1.75
NIT3	YLR351C	RSM22	P36056	628 aa		4.12	□□□□□ -1.75
NIT3	YLR351C	NTC20	P38302	140 aa	Predicted RBP	4.12	□□□□□ -1.75
NIT3	YLR351C	SHO1	P40073	367 aa		4.12	□□□□□ -1.75
NIT3	YLR351C	YGL260W	P53056	76 aa		4.12	□□□□□ -1.75
NIT3	YLR351C	ARX1	Q03862	593 aa	Known RBP	4.12	□□□□□ -1.75
NIT3	YLR351C	YDR131C	Q03899	556 aa		4.12	□□□□□ -1.75
NIT3	YLR351C	RRP45	Q05636	305 aa	Known RBP	4.12	□□□□□ -1.75
NIT3	YLR351C	TIP41	Q12199	356 aa		4.12	□□□□□ -1.75
NIT3	YLR351C	RRD2	Q12461	358 aa		4.12	□□□□□ -1.75
NIT3	YLR351C	DBF4	P32325	704 aa		4.11	□□□□□ -1.75
NIT3	YLR351C	YME2	P32843	850 aa		4.11	□□□□□ -1.75
NIT3	YLR351C	NIP100	P33420	868 aa		4.11	□□□□□ -1.75
NIT3	YLR351C	VHC1	P38329	1120 aa		4.11	□□□□□ -1.75
NIT3	YLR351C	MTC4	P38335	694 aa	Known RBP	4.11	□□□□□ -1.75
NIT3	YLR351C	MDM31	P38880	579 aa		4.11	□□□□□ -1.75
NIT3	YLR351C	DHH1	P39517	506 aa	Known RBP	4.11	□□□□□ -1.75
NIT3	YLR351C	RPH1	P39956	796 aa		4.11	□□□□□ -1.75
NIT3	YLR351C	GWT1	P47026	490 aa		4.11	□□□□□ -1.75
NIT3	YLR351C	SCS3	P53012	380 aa		4.11	□□□□□ -1.75
NIT3	YLR351C	KAP120	Q02932	1032 aa		4.11	□□□□□ -1.75
NIT3	YLR351C	SIL1	Q08199	421 aa		4.11	□□□□□ -1.75
NIT3	YLR351C	SET6	Q12529	373 aa		4.11	□□□□□ -1.75
NIT3	YLR351C	ATR1	P13090	542 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	SNT1	P25357	1226 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	YCR022C	P25620	114 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	PRP21	P32524	280 aa	Predicted RBP	4.1	□□□□□ -1.75
NIT3	YLR351C	FRE2	P36033	711 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	STB6	P36085	766 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	ARA1	P38115	344 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	HAT2	P39984	401 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	ALG8	P40351	577 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	RPR2	P40571	144 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	YFR016C	P43597	1233 aa	Known RBP	4.1	□□□□□ -1.75
NIT3	YLR351C	COS5	P47187	383 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	YGL138C	P53122	345 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	OGG1	P53397	376 aa	Predicted RBP	4.1	□□□□□ -1.75
NIT3	YLR351C	ROY1	Q04847	553 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	DON1	Q05610	365 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	COS7	Q07788	383 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	HSP42	Q12329	375 aa		4.1	□□□□□ -1.75
NIT3	YLR351C	RIP1	P08067	215 aa		4.09	□□□□□ -1.75
NIT3	YLR351C	RPL20A	P0CX23	172 aa	Known RBP	4.09	□□□□□ -1.75
NIT3	YLR351C	RPL20B	P0CX24	172 aa	Predicted RBP	4.09	□□□□□ -1.75
NIT3	YLR351C	ATS1	P31386	333 aa		4.09	□□□□□ -1.75
NIT3	YLR351C	LOS1	P33418	1100 aa	Predicted RBP	4.09	□□□□□ -1.75
NIT3	YLR351C	PMU1	P36069	295 aa		4.09	□□□□□ -1.75
NIT3	YLR351C	FMP46	P36141	133 aa	Known RBP	4.09	□□□□□ -1.75
NIT3	YLR351C	COS10	P52924	374 aa		4.09	□□□□□ -1.75
NIT3	YLR351C	DSL1	P53847	754 aa		4.09	□□□□□ -1.75
NIT3	YLR351C	BNI5	P53890	448 aa	Known RBP	4.09	□□□□□ -1.75
NIT3	YLR351C	HSP31	Q04432	237 aa		4.09	□□□□□ -1.75
NIT3	YLR351C	AYT1	Q12226	474 aa		4.09	□□□□□ -1.75
NIT3	YLR351C	AFI1	Q99222	893 aa		4.09	□□□□□ -1.75
NIT3	YLR351C	ISN1	Q99312	450 aa		4.09	□□□□□ -1.75
NIT3	YLR351C	SRV2	P17555	526 aa	Known RBP	4.08	□□□□□ -1.76
NIT3	YLR351C	PIM1	P36775	1133 aa		4.08	□□□□□ -1.76
NIT3	YLR351C	CCT2	P39076	527 aa	Known RBP	4.08	□□□□□ -1.76
NIT3	YLR351C	ISC1	P40015	477 aa	Known RBP	4.08	□□□□□ -1.76
NIT3	YLR351C	SKO1	Q02100	647 aa		4.08	□□□□□ -1.76
NIT3	YLR351C	PNG1	Q02890	363 aa		4.08	□□□□□ -1.76
NIT3	YLR351C	RMT2	Q03305	412 aa		4.08	□□□□□ -1.76
NIT3	YLR351C	ERB1	Q04660	807 aa	Known RBP	4.08	□□□□□ -1.76
NIT3	YLR351C	CFT1	Q06632	1357 aa	Known RBP	4.08	□□□□□ -1.76
NIT3	YLR351C	PPT2	Q12036	173 aa		4.08	□□□□□ -1.76
NIT3	YLR351C	ISA2	Q12425	185 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms