RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W MSS18P08593 268 aa9.55□□□□□ -0.88
SHH4YLR164W HOP09932 586 aa9.55□□□□□ -0.88
SHH4YLR164W SNF5P18480 905 aa9.55□□□□□ -0.88
SHH4YLR164W ADE1P27616 306 aa9.55□□□□□ -0.88
SHH4YLR164W CAT2P32796 670 aaKnown RBP9.55□□□□□ -0.88
SHH4YLR164W UGP1P32861 499 aaKnown RBP9.55□□□□□ -0.88
SHH4YLR164W DOM34P33309 386 aa9.55□□□□□ -0.88
SHH4YLR164W SKG1P36169 355 aa9.55□□□□□ -0.88
SHH4YLR164W APT2P36973 181 aa9.55□□□□□ -0.88
SHH4YLR164W MNT3P40549 630 aa9.55□□□□□ -0.88
SHH4YLR164W CSL4P53859 292 aaPredicted RBP9.55□□□□□ -0.88
SHH4YLR164W GMC2Q06201 188 aa9.55□□□□□ -0.88
SHH4YLR164W MEU1Q07938 337 aaKnown RBP RIP-Chip data9.55□□□□□ -0.88not detected
SHH4YLR164W YPR064WQ12492 139 aa9.55□□□□□ -0.88
SHH4YLR164W BRR1Q99177 341 aaPredicted RBP9.55□□□□□ -0.88
SHH4YLR164W Q0010Q9ZZX9 128 aa9.55□□□□□ -0.88
SHH4YLR164W CBP2P03874 630 aaPredicted RBP9.54□□□□□ -0.88
SHH4YLR164W ERG6P25087 383 aaKnown RBP9.54□□□□□ -0.88
SHH4YLR164W CDC5P32562 705 aa9.54□□□□□ -0.88
SHH4YLR164W PET127P32606 800 aa9.54□□□□□ -0.88
SHH4YLR164W CDC13P32797 924 aaKnown RBP9.54□□□□□ -0.88
SHH4YLR164W VPS21P36017 210 aaKnown RBP9.54□□□□□ -0.88
SHH4YLR164W GLG1P36143 616 aa9.54□□□□□ -0.88
SHH4YLR164W STP2P38704 541 aa9.54□□□□□ -0.88
SHH4YLR164W DSS1P39112 969 aa9.54□□□□□ -0.88
SHH4YLR164W FMP33P46998 180 aa9.54□□□□□ -0.88
SHH4YLR164W ASI2P53895 289 aa9.54□□□□□ -0.88
SHH4YLR164W HMO1Q03973 246 aaKnown RBP9.54□□□□□ -0.88
SHH4YLR164W MFB1Q04922 465 aa9.54□□□□□ -0.88
SHH4YLR164W RRP45Q05636 305 aaKnown RBP9.54□□□□□ -0.88
SHH4YLR164W PDR8Q06149 701 aa9.54□□□□□ -0.88
SHH4YLR164W RPN8Q08723 338 aaKnown RBP9.54□□□□□ -0.88
SHH4YLR164W ULA1Q12059 462 aa9.54□□□□□ -0.88
SHH4YLR164W FMP27Q06179 2628 aa9.53□□□□□ -0.88
SHH4YLR164W RPS17AP02407 136 aaKnown RBP9.53□□□□□ -0.88
SHH4YLR164W GAL7P08431 366 aa9.53□□□□□ -0.88
SHH4YLR164W RPL1AP0CX43 217 aaKnown RBP9.53□□□□□ -0.88
SHH4YLR164W RPL1BP0CX44 217 aaKnown RBP9.53□□□□□ -0.88
SHH4YLR164W GCD2P12754 651 aaPredicted RBP9.53□□□□□ -0.88
SHH4YLR164W RPS17BP14127 136 aaKnown RBP9.53□□□□□ -0.88
SHH4YLR164W BUB3P26449 341 aa9.53□□□□□ -0.88
SHH4YLR164W SFA1P32771 386 aa9.53□□□□□ -0.88
SHH4YLR164W FAA2P39518 744 aa9.53□□□□□ -0.88
SHH4YLR164W EGD1Q02642 157 aaKnown RBP9.53□□□□□ -0.88
SHH4YLR164W SKI8Q02793 397 aaPredicted RBP9.53□□□□□ -0.88
SHH4YLR164W REX4Q08237 289 aa9.53□□□□□ -0.88
SHH4YLR164W YOL107WQ12239 342 aa9.53□□□□□ -0.88
SHH4YLR164W NSI1Q12457 570 aa9.53□□□□□ -0.88
SHH4YLR164W TY4B-PA0A0B7P3V8 1104 aa9.52□□□□□ -0.89
SHH4YLR164W BCY1P07278 416 aaKnown RBP9.52□□□□□ -0.89
SHH4YLR164W LAT1P12695 482 aaKnown RBP9.52□□□□□ -0.89
SHH4YLR164W ERG1P32476 496 aaKnown RBP9.52□□□□□ -0.89
SHH4YLR164W MUM2P38236 366 aa9.52□□□□□ -0.89
SHH4YLR164W YEL020CP39994 560 aa9.52□□□□□ -0.89
SHH4YLR164W MAD2P40958 196 aa9.52□□□□□ -0.89
SHH4YLR164W YJL043WP47053 257 aa9.52□□□□□ -0.89
SHH4YLR164W MRK1P50873 501 aa9.52□□□□□ -0.89
SHH4YLR164W SDT1P53078 280 aa9.52□□□□□ -0.89
SHH4YLR164W ROG1P53118 685 aa9.52□□□□□ -0.89
SHH4YLR164W SPR6Q01684 191 aa9.52□□□□□ -0.89
SHH4YLR164W STP3Q05937 343 aa9.52□□□□□ -0.89
SHH4YLR164W ARR1Q06596 294 aa9.52□□□□□ -0.89
SHH4YLR164W GPI11Q06636 219 aa9.52□□□□□ -0.89
SHH4YLR164W PUN1Q06991 263 aa9.52□□□□□ -0.89
SHH4YLR164W YLL007CQ07799 665 aa9.52□□□□□ -0.89
SHH4YLR164W NTO1Q12311 748 aa9.52□□□□□ -0.89
SHH4YLR164W YDR262WQ12331 272 aa9.52□□□□□ -0.89
SHH4YLR164W RRP12Q12754 1228 aaKnown RBP9.52□□□□□ -0.89
SHH4YLR164W CAN1P04817 590 aa9.51□□□□□ -0.89
SHH4YLR164W BNA4P38169 460 aa9.51□□□□□ -0.89
SHH4YLR164W MAP2P38174 421 aaKnown RBP9.51□□□□□ -0.89
SHH4YLR164W RCK1P38622 512 aa9.51□□□□□ -0.89
SHH4YLR164W PAC11P40960 533 aa9.51□□□□□ -0.89
SHH4YLR164W RAD17P48581 401 aa9.51□□□□□ -0.89
SHH4YLR164W DIN7Q12086 430 aa9.51□□□□□ -0.89
SHH4YLR164W RTK1Q12100 620 aaPredicted RBP9.51□□□□□ -0.89
SHH4YLR164W SPB1P25582 841 aaPredicted RBP9.5□□□□□ -0.89
SHH4YLR164W ASC1P38011 319 aaKnown RBP9.5□□□□□ -0.89
SHH4YLR164W MNN2P38069 597 aa9.5□□□□□ -0.89
SHH4YLR164W BEM4P39011 633 aa9.5□□□□□ -0.89
SHH4YLR164W SWD1P39706 426 aa9.5□□□□□ -0.89
SHH4YLR164W PSA1P41940 361 aaKnown RBP9.5□□□□□ -0.89
SHH4YLR164W REH1Q06709 432 aa9.5□□□□□ -0.89
SHH4YLR164W MFG1Q07684 458 aa9.5□□□□□ -0.89
SHH4YLR164W MMT2Q08970 484 aa9.5□□□□□ -0.89
SHH4YLR164W GET4Q12125 312 aa9.5□□□□□ -0.89
SHH4YLR164W YOR342CQ12182 319 aa9.5□□□□□ -0.89
SHH4YLR164W RAD7P06779 565 aa9.49□□□□□ -0.89
SHH4YLR164W CMK2P22517 447 aa9.49□□□□□ -0.89
SHH4YLR164W PEX3P28795 441 aa9.49□□□□□ -0.89
SHH4YLR164W PRO1P32264 428 aa9.49□□□□□ -0.89
SHH4YLR164W SSO1P32867 290 aa9.49□□□□□ -0.89
SHH4YLR164W SLM4P38247 162 aa9.49□□□□□ -0.89
SHH4YLR164W EHT1P38295 451 aa9.49□□□□□ -0.89
SHH4YLR164W AIM2P39721 246 aa9.49□□□□□ -0.89
SHH4YLR164W QDR2P40474 542 aa9.49□□□□□ -0.89
SHH4YLR164W NEO1P40527 1151 aa9.49□□□□□ -0.89
SHH4YLR164W RMR1P53060 241 aa9.49□□□□□ -0.89
SHH4YLR164W GOR1P53839 350 aa9.49□□□□□ -0.89
SHH4YLR164W YPL071CQ02864 156 aa9.49□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 85.4 ms