RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C PHO12P38693 467 aa4.43□□□□□ -1.7
CDC48YDL126C UTP9P38882 575 aaKnown RBP4.43□□□□□ -1.7
CDC48YDL126C SKN7P38889 622 aa4.43□□□□□ -1.7
CDC48YDL126C YER186CP40101 306 aa4.43□□□□□ -1.7
CDC48YDL126C RGI2P40188 164 aa4.43□□□□□ -1.7
CDC48YDL126C PSF2P40359 213 aa4.43□□□□□ -1.7
CDC48YDL126C PRM2P40534 656 aa4.43□□□□□ -1.7
CDC48YDL126C CIN5P40917 295 aa4.43□□□□□ -1.7
CDC48YDL126C GTS1P40956 396 aa4.43□□□□□ -1.7
CDC48YDL126C AVT1P47082 602 aa4.43□□□□□ -1.7
CDC48YDL126C SSN8P47821 323 aa4.43□□□□□ -1.7
CDC48YDL126C CGR1P53188 120 aa4.43□□□□□ -1.7
CDC48YDL126C ART5P53244 586 aaKnown RBP4.43□□□□□ -1.7
CDC48YDL126C RTT102P53330 157 aa4.43□□□□□ -1.7
CDC48YDL126C URC2Q04411 772 aa4.43□□□□□ -1.7
CDC48YDL126C RBS1Q05672 457 aaKnown RBP4.43□□□□□ -1.7
CDC48YDL126C MEU1Q07938 337 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
CDC48YDL126C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
CDC48YDL126C UBX3Q12229 455 aa4.43□□□□□ -1.7
CDC48YDL126C BBP1Q12365 385 aa4.43□□□□□ -1.7
CDC48YDL126C SET6Q12529 373 aa4.43□□□□□ -1.7
CDC48YDL126C TDH1P00360 332 aaKnown RBP4.43□□□□□ -1.7
CDC48YDL126C GAL10P04397 699 aa4.43□□□□□ -1.7
CDC48YDL126C BUD5P25300 642 aaPredicted RBP4.43□□□□□ -1.7
CDC48YDL126C VAM7P32912 316 aa4.43□□□□□ -1.7
CDC48YDL126C SRB2P34162 210 aa4.43□□□□□ -1.7
CDC48YDL126C DAD2P36162 133 aa4.43□□□□□ -1.7
CDC48YDL126C NAT2P37293 288 aa4.43□□□□□ -1.7
CDC48YDL126C CHK1P38147 527 aa4.43□□□□□ -1.7
CDC48YDL126C CHS6P40955 746 aa4.43□□□□□ -1.7
CDC48YDL126C PAC11P40960 533 aa4.43□□□□□ -1.7
CDC48YDL126C ECM27P47144 725 aa4.43□□□□□ -1.7
CDC48YDL126C VMA10P48836 114 aaKnown RBP4.43□□□□□ -1.7
CDC48YDL126C TAF4P50105 388 aa4.43□□□□□ -1.7
CDC48YDL126C CUL3P53202 744 aa4.43□□□□□ -1.7
CDC48YDL126C PPM1Q04081 328 aa4.43□□□□□ -1.7
CDC48YDL126C YMR321CQ04898 105 aa4.43□□□□□ -1.7
CDC48YDL126C COQ9Q05779 260 aa4.43□□□□□ -1.7
CDC48YDL126C AAD4Q07747 329 aa4.43□□□□□ -1.7
CDC48YDL126C SIL1Q08199 421 aa4.43□□□□□ -1.7
CDC48YDL126C RSB1Q08417 382 aa4.43□□□□□ -1.7
CDC48YDL126C ATG29Q12092 213 aa4.43□□□□□ -1.7
CDC48YDL126C SWT1Q12104 458 aa4.43□□□□□ -1.7
CDC48YDL126C CYC1P00044 109 aaPredicted RBP4.42□□□□□ -1.7
CDC48YDL126C RPL6BP05739 176 aaKnown RBP4.42□□□□□ -1.7
CDC48YDL126C TUB1P09733 447 aaKnown RBP4.42□□□□□ -1.7
CDC48YDL126C DBF2P22204 572 aa4.42□□□□□ -1.7
CDC48YDL126C MLH1P38920 769 aa4.42□□□□□ -1.7
CDC48YDL126C RCY1P39531 840 aa4.42□□□□□ -1.7
CDC48YDL126C ARF3P40994 183 aaRIP-Chip data4.42□□□□□ -1.7not detected
CDC48YDL126C ELP2P42935 788 aa4.42□□□□□ -1.7
CDC48YDL126C ARC1P46672 376 aaKnown RBP4.42□□□□□ -1.7
CDC48YDL126C COQ6P53318 479 aa4.42□□□□□ -1.7
CDC48YDL126C EOS1P53938 366 aa4.42□□□□□ -1.7
CDC48YDL126C YMR210WQ03649 449 aa4.42□□□□□ -1.7
CDC48YDL126C RAD30Q04049 632 aa4.42□□□□□ -1.7
CDC48YDL126C YMR114CQ04471 368 aaKnown RBP4.42□□□□□ -1.7
CDC48YDL126C COX20Q04935 205 aa4.42□□□□□ -1.7
CDC48YDL126C TPO1Q07824 586 aa4.42□□□□□ -1.7
CDC48YDL126C IES4Q08561 116 aa4.42□□□□□ -1.7
CDC48YDL126C HER1Q12276 1246 aa4.42□□□□□ -1.7
CDC48YDL126C TRM11Q12463 433 aa4.42□□□□□ -1.7
CDC48YDL126C ECM29P38737 1868 aa4.42□□□□□ -1.7
CDC48YDL126C AFG1P32317 509 aa4.42□□□□□ -1.7
CDC48YDL126C YBL010CP32788 280 aa4.42□□□□□ -1.7
CDC48YDL126C MRP4P32902 394 aa4.42□□□□□ -1.7
CDC48YDL126C APN2P38207 520 aa4.42□□□□□ -1.7
CDC48YDL126C ALK1P43633 760 aaKnown RBP4.42□□□□□ -1.7
CDC48YDL126C EFR3Q03653 782 aaKnown RBP4.42□□□□□ -1.7
CDC48YDL126C IVY1Q04934 453 aa4.42□□□□□ -1.7
CDC48YDL126C CBP2P03874 630 aaPredicted RBP4.41□□□□□ -1.7
CDC48YDL126C ERG11P10614 530 aa4.41□□□□□ -1.7
CDC48YDL126C PYC1P11154 1178 aaKnown RBP4.41□□□□□ -1.7
CDC48YDL126C CBS1P14066 229 aa4.41□□□□□ -1.7
CDC48YDL126C YCR051WP25631 222 aa4.41□□□□□ -1.7
CDC48YDL126C VMA6P32366 345 aaKnown RBP4.41□□□□□ -1.7
CDC48YDL126C RGT1P32862 1170 aa4.41□□□□□ -1.7
CDC48YDL126C GLG2P47011 380 aa4.41□□□□□ -1.7
CDC48YDL126C RPS7BP48164 190 aaKnown RBP4.41□□□□□ -1.7
CDC48YDL126C EXG2P52911 562 aa4.41□□□□□ -1.7
CDC48YDL126C COS6P53344 381 aa4.41□□□□□ -1.7
CDC48YDL126C CWC25P53854 179 aaKnown RBP4.41□□□□□ -1.7
CDC48YDL126C CSL4P53859 292 aaPredicted RBP4.41□□□□□ -1.7
CDC48YDL126C YNL146WP53906 100 aa4.41□□□□□ -1.7
CDC48YDL126C SAM50P53969 484 aa4.41□□□□□ -1.7
CDC48YDL126C KAP120Q02932 1032 aa4.41□□□□□ -1.7
CDC48YDL126C MRPS17Q03246 237 aaPredicted RBP4.41□□□□□ -1.7
CDC48YDL126C ARP10Q04549 284 aa4.41□□□□□ -1.7
CDC48YDL126C BCH1Q05029 724 aa4.41□□□□□ -1.7
CDC48YDL126C ARR3Q06598 404 aa4.41□□□□□ -1.7
CDC48YDL126C MCA1Q08601 432 aa4.41□□□□□ -1.7
CDC48YDL126C SUL2Q12325 893 aa4.41□□□□□ -1.7
CDC48YDL126C GIS3Q12418 502 aa4.41□□□□□ -1.7
CDC48YDL126C MOT1P32333 1867 aa4.41□□□□□ -1.7
CDC48YDL126C YLR415CO13578 112 aa4.41□□□□□ -1.7
CDC48YDL126C DAL81P21657 970 aa4.41□□□□□ -1.7
CDC48YDL126C SLZ1P40167 298 aa4.41□□□□□ -1.7
CDC48YDL126C SCD6P45978 349 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
CDC48YDL126C HAM1P47119 197 aaKnown RBP4.41□□□□□ -1.7
CDC48YDL126C ASN1P49089 572 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms