RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APM3	YBR288C	ITR1	P30605	584 aa		3.15	□□□□□ -1.91
APM3	YBR288C	YGR149W	P48236	432 aa		3.15	□□□□□ -1.91
APM3	YBR288C	MTM1	P53320	366 aa		3.15	□□□□□ -1.91
APM3	YBR288C	HAL1	Q01766	294 aa		3.15	□□□□□ -1.91
APM3	YBR288C	PPM1	Q04081	328 aa		3.15	□□□□□ -1.91
APM3	YBR288C	TIM18	Q08749	192 aa		3.15	□□□□□ -1.91
APM3	YBR288C	LSB5	P25369	354 aa		3.14	□□□□□ -1.91
APM3	YBR288C	DSL1	P53847	754 aa		3.14	□□□□□ -1.91
APM3	YBR288C	APJ1	P53940	528 aa		3.14	□□□□□ -1.91
APM3	YBR288C	RSN1	Q03516	953 aa		3.14	□□□□□ -1.91
APM3	YBR288C	YDR387C	Q04162	555 aa		3.14	□□□□□ -1.91
APM3	YBR288C	MRD1	Q06106	887 aa	Known RBP	3.14	□□□□□ -1.91
APM3	YBR288C	SLY1	P22213	666 aa		3.13	□□□□□ -1.91
APM3	YBR288C	OCA4	P25366	362 aa		3.13	□□□□□ -1.91
APM3	YBR288C	GYP6	P32806	458 aa		3.13	□□□□□ -1.91
APM3	YBR288C	REC114	P32841	428 aa		3.13	□□□□□ -1.91
APM3	YBR288C	PMT1	P33775	817 aa		3.13	□□□□□ -1.91
APM3	YBR288C	YBR137W	P38276	179 aa		3.13	□□□□□ -1.91
APM3	YBR288C	CCT2	P39076	527 aa	Known RBP	3.13	□□□□□ -1.91
APM3	YBR288C	TFG2	P41896	400 aa	Predicted RBP	3.13	□□□□□ -1.91
APM3	YBR288C	RMD9	P53140	646 aa	Known RBP	3.13	□□□□□ -1.91
APM3	YBR288C	CWC25	P53854	179 aa	Known RBP	3.13	□□□□□ -1.91
APM3	YBR288C	RPT6	Q01939	405 aa	Known RBP	3.13	□□□□□ -1.91
APM3	YBR288C	TSA2	Q04120	196 aa		3.13	□□□□□ -1.91
APM3	YBR288C	YDL012C	Q12489	107 aa		3.13	□□□□□ -1.91
APM3	YBR288C	TRP1	P00912	224 aa		3.12	□□□□□ -1.91
APM3	YBR288C	NFT1	P0CE68	1218 aa		3.12	□□□□□ -1.91
APM3	YBR288C	ECM25	P32525	599 aa		3.12	□□□□□ -1.91
APM3	YBR288C	CMC1	P36064	111 aa		3.12	□□□□□ -1.91
APM3	YBR288C	MDG1	P53885	366 aa		3.12	□□□□□ -1.91
APM3	YBR288C	FDH1	Q08911	376 aa		3.12	□□□□□ -1.91
APM3	YBR288C	ATG29	Q12092	213 aa		3.12	□□□□□ -1.91
APM3	YBR288C	MET8	P15807	274 aa		3.11	□□□□□ -1.91
APM3	YBR288C	GFD2	P25370	566 aa	Known RBP	3.11	□□□□□ -1.91
APM3	YBR288C	SEC66	P33754	206 aa		3.11	□□□□□ -1.91
APM3	YBR288C	MRPL10	P36520	322 aa		3.11	□□□□□ -1.91
APM3	YBR288C	SPO22	P40511	975 aa		3.11	□□□□□ -1.91
APM3	YBR288C	FRE4	P53746	719 aa		3.11	□□□□□ -1.91
APM3	YBR288C	SVL3	Q03088	825 aa	Known RBP	3.11	□□□□□ -1.91
APM3	YBR288C	HSP31	Q04432	237 aa		3.11	□□□□□ -1.91
APM3	YBR288C	SNX3	Q08826	162 aa	Known RBP	3.11	□□□□□ -1.91
APM3	YBR288C	APE2	P32454	952 aa	Known RBP	3.1	□□□□□ -1.91
APM3	YBR288C	PRP21	P32524	280 aa	Predicted RBP	3.1	□□□□□ -1.91
APM3	YBR288C	NIP100	P33420	868 aa		3.1	□□□□□ -1.91
APM3	YBR288C	VMA13	P41807	478 aa	Known RBP	3.1	□□□□□ -1.91
APM3	YBR288C	HXT14	P42833	540 aa		3.1	□□□□□ -1.91
APM3	YBR288C	ECM27	P47144	725 aa		3.1	□□□□□ -1.91
APM3	YBR288C	YIF1	P53845	314 aa	Known RBP	3.1	□□□□□ -1.91
APM3	YBR288C	YMR181C	Q03231	154 aa		3.1	□□□□□ -1.91
APM3	YBR288C	YLR278C	Q05854	1341 aa		3.1	□□□□□ -1.91
APM3	YBR288C	VID24	P38263	362 aa		3.09	□□□□□ -1.91
APM3	YBR288C	YHR131C	P38835	850 aa		3.09	□□□□□ -1.91
APM3	YBR288C	BRO1	P48582	844 aa		3.09	□□□□□ -1.91
APM3	YBR288C	TOP1	P04786	769 aa		3.09	□□□□□ -1.92
APM3	YBR288C	RPI1	P23250	407 aa	Known RBP	3.09	□□□□□ -1.92
APM3	YBR288C	MRP21	P38175	177 aa		3.09	□□□□□ -1.92
APM3	YBR288C	SSU1	P41930	458 aa		3.09	□□□□□ -1.92
APM3	YBR288C	TEF1	P02994	458 aa	Known RBP	3.08	□□□□□ -1.92
APM3	YBR288C	CYC3	P06182	269 aa		3.08	□□□□□ -1.92
APM3	YBR288C	GPI10	P30777	616 aa		3.08	□□□□□ -1.92
APM3	YBR288C	MUD1	P32605	298 aa	Known RBP	3.08	□□□□□ -1.92
APM3	YBR288C	YNR048W	P53740	393 aa		3.08	□□□□□ -1.92
APM3	YBR288C	IMH1	Q06704	911 aa	Known RBP	3.08	□□□□□ -1.92
APM3	YBR288C	HIS4	P00815	799 aa	Known RBP	3.07	□□□□□ -1.92
APM3	YBR288C	ARG3	P05150	338 aa		3.07	□□□□□ -1.92
APM3	YBR288C	SPS4	P09937	338 aa		3.07	□□□□□ -1.92
APM3	YBR288C	POP5	P28005	173 aa		3.07	□□□□□ -1.92
APM3	YBR288C	LYS1	P38998	373 aa	RIP-Chip data	3.07	□□□□□ -1.92	RIP-Chip
APM3	YBR288C	MET18	P40469	1032 aa		3.07	□□□□□ -1.92
APM3	YBR288C	TIM10	P87108	93 aa		3.07	□□□□□ -1.92
APM3	YBR288C	RIM20	Q12033	661 aa		3.07	□□□□□ -1.92
APM3	YBR288C	ARG4	P04076	463 aa	Predicted RBP	3.06	□□□□□ -1.92
APM3	YBR288C	PPH22	P23595	377 aa		3.06	□□□□□ -1.92
APM3	YBR288C	VTC2	P43585	828 aa		3.06	□□□□□ -1.92
APM3	YBR288C	SYF1	Q04048	859 aa	Predicted RBP	3.06	□□□□□ -1.92
APM3	YBR288C	IRC25	Q07951	179 aa		3.06	□□□□□ -1.92
APM3	YBR288C	MON2	P48563	1636 aa	Predicted RBP	3.06	□□□□□ -1.92
APM3	YBR288C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	RIP-Chip
APM3	YBR288C	SNT1	P25357	1226 aa		3.05	□□□□□ -1.92
APM3	YBR288C	HCS1	P34243	683 aa		3.05	□□□□□ -1.92
APM3	YBR288C	KKQ8	P36004	724 aa		3.05	□□□□□ -1.92
APM3	YBR288C	SAS2	P40963	338 aa		3.05	□□□□□ -1.92
APM3	YBR288C	JJJ1	P53863	590 aa		3.05	□□□□□ -1.92
APM3	YBR288C	GIR2	Q03768	265 aa	Predicted RBP	3.05	□□□□□ -1.92
APM3	YBR288C	ORT1	Q12375	292 aa		3.05	□□□□□ -1.92
APM3	YBR288C	NUP2	P32499	720 aa		3.04	□□□□□ -1.92
APM3	YBR288C	KAR9	P32526	644 aa		3.04	□□□□□ -1.92
APM3	YBR288C	SLX1	P38324	304 aa		3.04	□□□□□ -1.92
APM3	YBR288C	VHC1	P38329	1120 aa		3.04	□□□□□ -1.92
APM3	YBR288C	YHR054C	P38780	354 aa		3.04	□□□□□ -1.92
APM3	YBR288C	ESL1	P40456	1118 aa		3.04	□□□□□ -1.92
APM3	YBR288C	RQC1	Q05468	723 aa	Known RBP	3.04	□□□□□ -1.92
APM3	YBR288C	GPH1	P06738	902 aa	Known RBP	3.03	□□□□□ -1.92
APM3	YBR288C	RIP1	P08067	215 aa		3.03	□□□□□ -1.92
APM3	YBR288C	IMP2'	P32351	346 aa		3.03	□□□□□ -1.92
APM3	YBR288C	CSE2	P33308	149 aa		3.03	□□□□□ -1.92
APM3	YBR288C	GAB1	P41733	394 aa		3.03	□□□□□ -1.92
APM3	YBR288C	HMS2	P47175	358 aa		3.03	□□□□□ -1.92
APM3	YBR288C	CUE5	Q08412	411 aa	Known RBP	3.03	□□□□□ -1.92
APM3	YBR288C	YRM1	Q12340	786 aa		3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms