RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 EHD4Q9H223 541 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 HYOU1Q9Y4L1 999 aa15.31■□□□□ 0.04
PHGDH-233ENST00000642021 KDM4FA0A1W2PPD8 638 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 PJA2O43164 708 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 ITIH3Q06033 890 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 DNAJC19Q96DA6 116 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 RBM12Q9NTZ6 932 aaKnown RBP15.3■□□□□ 0.04
PHGDH-233ENST00000642021 TBC1D7Q9P0N9 293 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 CLGNO14967 610 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 TCP1P17987 556 aaKnown RBP15.3■□□□□ 0.04
PHGDH-233ENST00000642021 TNNI2P48788 182 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 PDIA5Q14554 519 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 TMEM119Q4V9L6 283 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 CACNA2D4Q7Z3S7 1137 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 HAS1Q92839 578 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 GPCPD1Q9NPB8 672 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 RTCBQ9Y3I0 505 aaKnown RBP15.3■□□□□ 0.04
PHGDH-233ENST00000642021 DDX60LQ5H9U9 1706 aaKnown RBP15.3■□□□□ 0.04
PHGDH-233ENST00000642021 NRAPQ86VF7 1730 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 PPP1R11O60927 126 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-233ENST00000642021 MMP14P50281 582 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 ADCY7P51828 1080 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 ORC2Q13416 577 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-233ENST00000642021 TMEM266Q2M3C6 531 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 ZCWPW2Q504Y3 356 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 FAM182BQ5T319 152 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 KRT79Q5XKE5 535 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 ALS2CR12Q96Q35 445 aa15.3■□□□□ 0.04
PHGDH-233ENST00000642021 ABCB11O95342 1321 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 GOLGA6CA6NDK9 693 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 PPFIA4O75335 1185 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 GOLGA6DP0CG33 693 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 TDRD12Q587J7 1177 aaKnown RBP15.29■□□□□ 0.04
PHGDH-233ENST00000642021 GOLGA6AQ9NYA3 693 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 MTMR4Q9NYA4 1195 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 TNRC6CQ9HCJ0 1690 aaKnown RBP15.29■□□□□ 0.04
PHGDH-233ENST00000642021 TRAF5O00463 557 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 DNA2P51530 1060 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 COASYQ13057 564 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 CCDC181Q5TID7 509 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 TTBK2Q6IQ55 1244 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 CCDC70Q6NSX1 233 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 FAM76AQ8TAV0 307 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 STIM2Q9P246 746 aa15.29■□□□□ 0.04
PHGDH-233ENST00000642021 UFL1O94874 794 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 FGFR1OPO95684 399 aaKnown RBP15.28■□□□□ 0.04
PHGDH-233ENST00000642021 AKR1B1P15121 316 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 NAP1L1P55209 391 aaKnown RBP15.28■□□□□ 0.04
PHGDH-233ENST00000642021 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-233ENST00000642021 MFSD14BQ5SR56 506 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 FAM83BQ5T0W9 1011 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 MYOCDQ8IZQ8 938 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 ARL8AQ96BM9 186 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 RABEP2Q9H5N1 569 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 NAV1Q8NEY1 1877 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 SSU72P8A0A1W2PR75 194 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 ZSCAN5CA6NGD5 496 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-233ENST00000642021 SHOX2O60902 331 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-233ENST00000642021 GLI1P08151 1106 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 IRAK1P51617 712 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 NELFCDQ8IXH7 590 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 JMJD4Q9H9V9 463 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 RIC8AQ9NPQ8 531 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 COL4A3BPQ9Y5P4 624 aa15.28■□□□□ 0.04
PHGDH-233ENST00000642021 NPHP3-ACAD11A0A0J9YXS1 232 aa15.27■□□□□ 0.04
PHGDH-233ENST00000642021 E9PMD0 336 aa15.27■□□□□ 0.04
PHGDH-233ENST00000642021 SSBP05455 408 aaKnown RBP eCLIP15.27■□□□□ 0.04
PHGDH-233ENST00000642021 POLR2FP61218 127 aaKnown RBP15.27■□□□□ 0.04
PHGDH-233ENST00000642021 FKBP3Q00688 224 aaKnown RBP15.27■□□□□ 0.04
PHGDH-233ENST00000642021 PICALMQ13492 652 aa15.27■□□□□ 0.04
PHGDH-233ENST00000642021 NOX5Q96PH1 765 aa15.27■□□□□ 0.04
PHGDH-233ENST00000642021 SH3GL2Q99962 352 aa15.27■□□□□ 0.04
PHGDH-233ENST00000642021 CCNL1Q9UK58 526 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-233ENST00000642021 SBF2Q86WG5 1849 aa15.27■□□□□ 0.03
PHGDH-233ENST00000642021 SLURP2P0DP57 97 aa15.27■□□□□ 0.03
PHGDH-233ENST00000642021 KLRC1P26715 233 aa15.27■□□□□ 0.03
PHGDH-233ENST00000642021 SLC16A2P36021 539 aa15.27■□□□□ 0.03
PHGDH-233ENST00000642021 PAFAH1B1P43034 410 aa15.27■□□□□ 0.03
PHGDH-233ENST00000642021 PSMD2Q13200 908 aa15.27■□□□□ 0.03
PHGDH-233ENST00000642021 TTC19Q6DKK2 380 aaPredicted RBP15.27■□□□□ 0.03
PHGDH-233ENST00000642021 C15orf52Q6ZUT6 534 aaKnown RBP15.27■□□□□ 0.03
PHGDH-233ENST00000642021 TSG101Q99816 390 aa15.27■□□□□ 0.03
PHGDH-233ENST00000642021 RAB34Q9BZG1 259 aa15.27■□□□□ 0.03
PHGDH-233ENST00000642021 PANK4Q9NVE7 773 aa15.27■□□□□ 0.03
PHGDH-233ENST00000642021 PACSIN2Q9UNF0 486 aaPredicted RBP15.27■□□□□ 0.03
PHGDH-233ENST00000642021 ESYT3A0FGR9 886 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 RBAK-RBAKDNI3L0D1 243 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 PALMO75781 387 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 FTCDO95954 541 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 SNHG28P0DPA3 235 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 IL1R1P14778 569 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 ARID5AQ03989 594 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 ENOX2Q16206 610 aaKnown RBP15.26■□□□□ 0.03
PHGDH-233ENST00000642021 CCDC40Q4G0X9 1142 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 ADGRF4Q8IZF3 695 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 TBC1D5Q92609 795 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 LSM14BQ9BX40 385 aaKnown RBP15.26■□□□□ 0.03
PHGDH-233ENST00000642021 DDX25Q9UHL0 483 aaKnown RBP15.26■□□□□ 0.03
PHGDH-233ENST00000642021 FAM153BP0C7A2 387 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 CARSP49589 748 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms