RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 LRRC55Q6ZSA7 311 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 LENG9Q96B70 501 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 NT5C3AQ9H0P0 336 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 ZNF446Q9NWS9 450 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 TMOD2Q9NZR1 351 aa18.88■□□□□ 0.61
PHGDH-229ENST00000641891 CNTNAP1P78357 1384 aa18.87■□□□□ 0.61
PHGDH-229ENST00000641891 EFCAB8A8MWE9 144 aa18.87■□□□□ 0.61
PHGDH-229ENST00000641891 SPIRE1Q08AE8 756 aa18.87■□□□□ 0.61
PHGDH-229ENST00000641891 BTNL9Q6UXG8 535 aa18.87■□□□□ 0.61
PHGDH-229ENST00000641891 GPBP1Q86WP2 473 aa18.87■□□□□ 0.61
PHGDH-229ENST00000641891 SPDYE3A6NKU9 549 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 PSMD2Q13200 908 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 VWA3BQ502W6 1294 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 NCAPH2Q6IBW4 605 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 LARGE2Q8N3Y3 721 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 TTLL6Q8N841 843 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 ERGIC2Q96RQ1 377 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 GMLQ99445 158 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 HERC5Q9UII4 1024 aaKnown RBP18.86■□□□□ 0.61
PHGDH-229ENST00000641891 DDX41Q9UJV9 622 aaKnown RBP18.86■□□□□ 0.61
PHGDH-229ENST00000641891 SMCHD1A6NHR9 2005 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 EPHB6O15197 1021 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 SREBF1P36956 1147 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 MMP14P50281 582 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 HERVK_113P62684 666 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 LRRC63Q05C16 580 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 DLGAP5Q15398 846 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 MEA1Q16626 185 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 FAM26FQ5R3K3 315 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 FKBP15Q5T1M5 1219 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 MOXD1Q6UVY6 613 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 SLFN12Q8IYM2 578 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 MYOCDQ8IZQ8 938 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 CYP2W1Q8TAV3 490 aa18.86■□□□□ 0.61
PHGDH-229ENST00000641891 MEIS1O00470 390 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 TFRCP02786 760 aaKnown RBP18.85■□□□□ 0.61
PHGDH-229ENST00000641891 VIL1P09327 827 aaKnown RBP18.85■□□□□ 0.61
PHGDH-229ENST00000641891 CYP11B2P19099 503 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 CLCN6P51797 869 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 PSMC6P62333 389 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 TSR1Q2NL82 804 aaKnown RBP18.85■□□□□ 0.61
PHGDH-229ENST00000641891 GLIPR1L2Q4G1C9 344 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 FAM83BQ5T0W9 1011 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 FEZ1Q99689 392 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 NUP58Q9BVL2 599 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 NDST4Q9H3R1 872 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 VEZTQ9HBM0 779 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 ZBED6P86452 979 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 ZYXQ15942 572 aaKnown RBP18.85■□□□□ 0.61
PHGDH-229ENST00000641891 Q4G0T1 1027 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 ARSHQ5FYA8 562 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 TEX35Q5T0J7 233 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 CATSPER3Q86XQ3 398 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 NELFCDQ8IXH7 590 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 ZSWIM4Q9H7M6 989 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 RGS17Q9UGC6 210 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-229ENST00000641891 SIK3Q9Y2K2 1263 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 PCDHA2Q9Y5H9 948 aa18.85■□□□□ 0.61
PHGDH-229ENST00000641891 DPEP1P16444 411 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 STAT2P52630 851 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 SLC12A3P55017 1021 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 MAN2A1Q16706 1144 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 KIF4BQ2VIQ3 1234 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 ZCWPW2Q504Y3 356 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 POTEAQ6S8J7 498 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 MIGA2Q7L4E1 593 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 GPIHBP1Q8IV16 184 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 RETREG2Q8NC44 543 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 FAM151AQ8WW52 585 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 TBC1D5Q92609 795 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 TMEM39BQ9GZU3 492 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 ARHGEF10LQ9HCE6 1279 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 ZBTB21Q9ULJ3 1066 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 GUCA1BQ9UMX6 200 aa18.84■□□□□ 0.61
PHGDH-229ENST00000641891 KCNA3P22001 575 aa18.83■□□□□ 0.61
PHGDH-229ENST00000641891 SPDYE2Q495Y8 402 aa18.83■□□□□ 0.61
PHGDH-229ENST00000641891 CCDC174Q6PII3 467 aa18.83■□□□□ 0.61
PHGDH-229ENST00000641891 SLC30A10Q6XR72 485 aa18.83■□□□□ 0.61
PHGDH-229ENST00000641891 RSRC2Q7L4I2 434 aaKnown RBP18.83■□□□□ 0.61
PHGDH-229ENST00000641891 CCDC155Q8N6L0 562 aa18.83■□□□□ 0.61
PHGDH-229ENST00000641891 TSG101Q99816 390 aa18.83■□□□□ 0.61
PHGDH-229ENST00000641891 FAM207AQ9NSI2 230 aaPredicted RBP18.83■□□□□ 0.61
PHGDH-229ENST00000641891 BMP2KQ9NSY1 1161 aaPredicted RBP18.83■□□□□ 0.61
PHGDH-229ENST00000641891 CTAGE9A4FU28 777 aa18.83■□□□□ 0.6
PHGDH-229ENST00000641891 MSH4O15457 936 aa18.83■□□□□ 0.6
PHGDH-229ENST00000641891 SPATA31C1P0DKV0 1188 aa18.83■□□□□ 0.6
PHGDH-229ENST00000641891 SAMD1Q6SPF0 538 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-229ENST00000641891 CCDC65Q8IXS2 484 aa18.83■□□□□ 0.6
PHGDH-229ENST00000641891 RTKN2Q8IZC4 609 aa18.83■□□□□ 0.6
PHGDH-229ENST00000641891 PSMD1Q99460 953 aa18.83■□□□□ 0.6
PHGDH-229ENST00000641891 NHEJ1Q9H9Q4 299 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-229ENST00000641891 PRDM10Q9NQV6 1147 aa18.83■□□□□ 0.6
PHGDH-229ENST00000641891 OGFRQ9NZT2 677 aa18.83■□□□□ 0.6
PHGDH-229ENST00000641891 TMX2Q9Y320 296 aa18.83■□□□□ 0.6
PHGDH-229ENST00000641891 FGFR1OPO95684 399 aaKnown RBP18.82■□□□□ 0.6
PHGDH-229ENST00000641891 FOSP01100 380 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-229ENST00000641891 PABPC4Q13310 644 aaKnown RBP eCLIP18.82■□□□□ 0.69e-7■■■■□ 21.6
PHGDH-229ENST00000641891 HERC4Q5GLZ8 1057 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-229ENST00000641891 CCDC84Q86UT8 332 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-229ENST00000641891 OGFOD1Q8N543 542 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms