RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ARVCFO00192 962 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 VWA5AO00534 786 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 ZBED4O75132 1171 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 ADAMTS4O75173 837 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 DUSP11O75319 330 aaKnown RBP10.77□□□□□ -0.69
PHGDH-228ENST00000641847 C6orf222P0C671 652 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-228ENST00000641847 NAPAP54920 295 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 PKP1Q13835 747 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 USH1GQ495M9 461 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 KRT40Q6A162 431 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 PPP1R18Q6NYC8 613 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 OTOP2Q7RTS6 562 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 FBXO11Q86XK2 927 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 MSL3Q8N5Y2 521 aaKnown RBP10.77□□□□□ -0.69
PHGDH-228ENST00000641847 CCDC148Q8NFR7 591 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 UIMC1Q96RL1 719 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 AMNQ9BXJ7 453 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 GJB4Q9NTQ9 266 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 BARHL2Q9NY43 387 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 MTMR6Q9Y217 621 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 YBX2Q9Y2T7 364 aaKnown RBP10.77□□□□□ -0.69
PHGDH-228ENST00000641847 ZNF536O15090 1300 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 SYNRGQ9UMZ2 1314 aa10.77□□□□□ -0.69
PHGDH-228ENST00000641847 TCF20Q9UGU0 1960 aaKnown RBP10.76□□□□□ -0.69
PHGDH-228ENST00000641847 ZBBXA8MT70 800 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 PI4K2BG5E9Z4 385 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 TLL1O43897 1013 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 MMP1P03956 469 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 ICAM1P05362 532 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 ZNF865P0CJ78 1059 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-228ENST00000641847 ATXN8OSP0DMR3 200 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 FDX1P10109 184 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 ALADP13716 330 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 POU3F3P20264 500 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-228ENST00000641847 CYP2C18P33260 490 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 CDK7P50613 346 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 NUCB2P80303 420 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 GNASQ5JWF2 1037 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 FOXD4L5Q5VV16 416 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-228ENST00000641847 TYW1BQ6NUM6 668 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 REPS2Q8NFH8 660 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 FBXO18Q8NFZ0 1043 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 CCDC12Q8WUD4 166 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-228ENST00000641847 FOXD4L4Q8WXT5 416 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-228ENST00000641847 PHF20Q9BVI0 1012 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 KCNH6Q9H252 994 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 HIPK3Q9H422 1215 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 RAVER2Q9HCJ3 691 aaKnown RBP10.76□□□□□ -0.69
PHGDH-228ENST00000641847 SH3GLB2Q9NR46 395 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 CHMP5Q9NZZ3 219 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 CCPG1Q9ULG6 757 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 ADAMTS5Q9UNA0 930 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 KCNJ14Q9UNX9 436 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 MTCH2Q9Y6C9 303 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 ZNF236Q9UL36 1845 aa10.76□□□□□ -0.69
PHGDH-228ENST00000641847 BRD1O95696 1058 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 PGK2P07205 417 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 ASGR1P07306 291 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 PDIA4P13667 645 aaKnown RBP10.75□□□□□ -0.69
PHGDH-228ENST00000641847 ATP2A2P16615 1042 aaKnown RBP10.75□□□□□ -0.69
PHGDH-228ENST00000641847 RABGGTBP53611 331 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 OAZ1P54368 228 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 NLRP5P59047 1200 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 SAFBQ15424 915 aaKnown RBP eCLIP10.75□□□□□ -0.69
PHGDH-228ENST00000641847 ZNF792Q3KQV3 632 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 CPXCR1Q8N123 301 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 FAM177A1Q8N128 213 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-228ENST00000641847 RGS22Q8NE09 1264 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 KLHDC9Q8NEP7 349 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 AGBL1Q96MI9 1066 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 SEZ6LQ9BYH1 1024 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 ZHX1Q9UKY1 873 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-228ENST00000641847 PCDHA1Q9Y5I3 950 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 ABCB11O95342 1321 aa10.75□□□□□ -0.69
PHGDH-228ENST00000641847 PLXNA1Q9UIW2 1896 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 MYH15Q9Y2K3 1946 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 ESYT2A0FGR8 921 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 KIF28PB7ZC32 967 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 ATP2A1O14983 1001 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 ZSCAN22P10073 491 aaPredicted RBP10.74□□□□□ -0.69
PHGDH-228ENST00000641847 CALML3P27482 149 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 CST5P28325 142 aaPredicted RBP10.74□□□□□ -0.69
PHGDH-228ENST00000641847 KRT2P35908 639 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 ADCY7P51828 1080 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 TRAF1Q13077 416 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 GNL2Q13823 731 aaKnown RBP10.74□□□□□ -0.69
PHGDH-228ENST00000641847 TMEM132BQ14DG7 1078 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 MCTP1Q6DN14 999 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 SNRNP48Q6IEG0 339 aaKnown RBP10.74□□□□□ -0.69
PHGDH-228ENST00000641847 FERMT3Q86UX7 667 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 FAM126BQ8IXS8 530 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 DIS3L2Q8IYB7 885 aaKnown RBP10.74□□□□□ -0.69
PHGDH-228ENST00000641847 LENG1Q96BZ8 264 aaPredicted RBP10.74□□□□□ -0.69
PHGDH-228ENST00000641847 TEX13BQ9BXU2 312 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 BRMS1Q9HCU9 246 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 C6orf50Q9HD87 102 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 PNMA2Q9UL42 364 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 ZNF214Q9UL59 606 aaPredicted RBP10.74□□□□□ -0.69
PHGDH-228ENST00000641847 PCDHA4Q9UN74 947 aa10.74□□□□□ -0.69
PHGDH-228ENST00000641847 ZDHHC9Q9Y397 364 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms