RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 EPB41L5Q9HCM4 733 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 SYNRGQ9UMZ2 1314 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 PHF20L1A8MW92 1017 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 BUB1O43683 1085 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 IFNAR1P17181 557 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 CMA1P23946 247 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 FUT2Q10981 343 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 AOC3Q16853 763 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 INTS13Q9NVM9 706 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 KCNJ14Q9UNX9 436 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 COL4A5P29400 1685 aa13.05□□□□□ -0.32
RBFOX1-224ENST00000641259 TMTC1Q8IUR5 882 aa13.05□□□□□ -0.32
RBFOX1-224ENST00000641259 CRACR2BQ8N4Y2 399 aaPredicted RBP13.05□□□□□ -0.32
RBFOX1-224ENST00000641259 FAM163AQ96GL9 167 aaPredicted RBP13.05□□□□□ -0.32
RBFOX1-224ENST00000641259 TANGO6Q9C0B7 1094 aa13.05□□□□□ -0.32
RBFOX1-224ENST00000641259 MAN1B1Q9UKM7 699 aa13.05□□□□□ -0.32
RBFOX1-224ENST00000641259 RAB21Q9UL25 225 aa13.05□□□□□ -0.32
RBFOX1-224ENST00000641259 FAM184BQ9ULE4 1060 aa13.05□□□□□ -0.32
RBFOX1-224ENST00000641259 C10orf71Q711Q0 1435 aa13.05□□□□□ -0.32
RBFOX1-224ENST00000641259 TFAP4Q01664 338 aa13.05□□□□□ -0.32
RBFOX1-224ENST00000641259 TBC1D22AQ8WUA7 517 aa13.05□□□□□ -0.32
RBFOX1-224ENST00000641259 MTA3Q9BTC8 594 aa13.05□□□□□ -0.32
RBFOX1-224ENST00000641259 TSPY2A6NKD2 308 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 H0Y3Z8 333 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 SNUPNO95149 360 aaKnown RBP13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 PYGLP06737 847 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 MYH6P13533 1939 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 C21orf2O43822 256 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 EVI5O60447 810 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 NEFHP12036 1026 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 VEGFAP15692 232 aaPredicted RBP13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 KCNJ6P48051 423 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 RWDD2BP57060 319 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 SSRP1Q08945 709 aaKnown RBP13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 PICALMQ13492 652 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 KIF2BQ8N4N8 673 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 HVCN1Q96D96 273 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 DUSP10Q9Y6W6 482 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 KIF3CO14782 793 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 NCK2O43639 380 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 CDKL5O76039 1030 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 PCP11498 1178 aaKnown RBP13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 KCNA3P22001 575 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 TAF11Q15544 211 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 PKN1Q16512 942 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 CCDC50Q8IVM0 306 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 CCDC42Q96M95 316 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 STK36Q9NRP7 1315 aa13.04□□□□□ -0.32
RBFOX1-224ENST00000641259 ZSCAN5CA6NGD5 496 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 ECE2O60344 883 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 PPP1R37O75864 691 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 LDHCP07864 332 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 RASA1P20936 1047 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 NBPF20Q3BBV1 942 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 CCNI2Q6ZMN8 369 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 ZIM3Q96PE6 472 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 ADAMTS3O15072 1205 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 MFAP3LO75121 409 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 ERFP50548 548 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 KRT71Q3SY84 523 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 GKAP1Q5VSY0 366 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 SLC30A9Q6PML9 568 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 TMTC2Q8N394 836 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 ZNF483Q8TF39 744 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 TRIM4Q9C037 500 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 NOD2Q9HC29 1040 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 A0A1W2PQ27 194 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 A0A1W2PQ64 194 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 A0A1W2PQD8 194 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 ANP32DO95626 131 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 BAG6P46379 1132 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 METTL16Q86W50 562 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 LONP2Q86WA8 852 aa13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.03□□□□□ -0.32
RBFOX1-224ENST00000641259 GCOM1H8Y6P7 765 aaPredicted RBP13.02□□□□□ -0.32
RBFOX1-224ENST00000641259 TACC1O75410 805 aa13.02□□□□□ -0.32
RBFOX1-224ENST00000641259 MYZAPP0CAP1 466 aa13.02□□□□□ -0.32
RBFOX1-224ENST00000641259 CACNB3P54284 484 aa13.02□□□□□ -0.32
RBFOX1-224ENST00000641259 APOBEC3HQ6NTF7 200 aaKnown RBP13.02□□□□□ -0.32
RBFOX1-224ENST00000641259 KIAA0825Q8IV33 1275 aa13.02□□□□□ -0.32
RBFOX1-224ENST00000641259 ZFPM1Q8IX07 1006 aa13.02□□□□□ -0.32
RBFOX1-224ENST00000641259 SRBD1Q8N5C6 995 aaKnown RBP13.02□□□□□ -0.32
RBFOX1-224ENST00000641259 C3orf20Q8ND61 904 aa13.02□□□□□ -0.32
RBFOX1-224ENST00000641259 OXER1Q8TDS5 423 aa13.02□□□□□ -0.32
RBFOX1-224ENST00000641259 YDJCA8MPS7 323 aa13.02□□□□□ -0.33
RBFOX1-224ENST00000641259 TMCO5BA8MYB1 307 aa13.02□□□□□ -0.33
RBFOX1-224ENST00000641259 USO1O60763 962 aaKnown RBP13.02□□□□□ -0.33
RBFOX1-224ENST00000641259 SMTNP53814 917 aa13.02□□□□□ -0.33
RBFOX1-224ENST00000641259 TUBB4BP68371 445 aa13.02□□□□□ -0.33
RBFOX1-224ENST00000641259 NFIAQ12857 509 aa13.02□□□□□ -0.33
RBFOX1-224ENST00000641259 PRPF4BQ13523 1007 aaKnown RBP13.02□□□□□ -0.33
RBFOX1-224ENST00000641259 SHC4Q6S5L8 630 aa13.02□□□□□ -0.33
RBFOX1-224ENST00000641259 ANKS4BQ8N8V4 417 aa13.02□□□□□ -0.33
RBFOX1-224ENST00000641259 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.33
RBFOX1-224ENST00000641259 TSEN2Q8NCE0 465 aaKnown RBP13.02□□□□□ -0.33
RBFOX1-224ENST00000641259 VCPKMTQ9H867 229 aa13.02□□□□□ -0.33
RBFOX1-224ENST00000641259 PRPF6O94906 941 aaKnown RBP13.02□□□□□ -0.33
RBFOX1-224ENST00000641259 GNAT1P11488 350 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms