RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 GUCD1Q96NT3 240 aa29.01■■■□□ 2.23
VEGFA-232ENST00000640653 SEMA6BQ9H3T3 888 aa29.01■■■□□ 2.23
VEGFA-232ENST00000640653 BRPF3Q9ULD4 1205 aa29.01■■■□□ 2.23
VEGFA-232ENST00000640653 PITPNM1O00562 1244 aa29■■■□□ 2.23
VEGFA-232ENST00000640653 F2P00734 622 aa29■■■□□ 2.23
VEGFA-232ENST00000640653 PFKMP08237 780 aa29■■■□□ 2.23
VEGFA-232ENST00000640653 HOXD8P13378 290 aaPredicted RBP29■■■□□ 2.23
VEGFA-232ENST00000640653 ICAM3P32942 547 aa29■■■□□ 2.23
VEGFA-232ENST00000640653 PSEN2P49810 448 aa29■■■□□ 2.23
VEGFA-232ENST00000640653 BFSP2Q13515 415 aa29■■■□□ 2.23
VEGFA-232ENST00000640653 PTGISQ16647 500 aa29■■■□□ 2.23
VEGFA-232ENST00000640653 HSDL1Q3SXM5 330 aa29■■■□□ 2.23
VEGFA-232ENST00000640653 PCNX4Q63HM2 1172 aa29■■■□□ 2.23
VEGFA-232ENST00000640653 HEATR3Q7Z4Q2 680 aa29■■■□□ 2.23
VEGFA-232ENST00000640653 C7orf31Q8N865 590 aa29■■■□□ 2.23
VEGFA-232ENST00000640653 RETREG2Q8NC44 543 aa29■■■□□ 2.23
VEGFA-232ENST00000640653 GPKOWQ92917 476 aaPredicted RBP eCLIP29■■■□□ 2.239e-7■□□□□ 11
VEGFA-232ENST00000640653 KLF18A0A0U1RQI7 1052 aa28.99■■■□□ 2.23
VEGFA-232ENST00000640653 FIBPO43427 364 aa28.99■■■□□ 2.23
VEGFA-232ENST00000640653 SORBS3O60504 671 aa28.99■■■□□ 2.23
VEGFA-232ENST00000640653 ZNF286BP0CG31 522 aa28.99■■■□□ 2.23
VEGFA-232ENST00000640653 HSPA4P34932 840 aa28.99■■■□□ 2.23
VEGFA-232ENST00000640653 NEDD9Q14511 834 aa28.99■■■□□ 2.23
VEGFA-232ENST00000640653 MFSD10Q14728 455 aa28.99■■■□□ 2.23
VEGFA-232ENST00000640653 CCDC155Q8N6L0 562 aa28.99■■■□□ 2.23
VEGFA-232ENST00000640653 RTEL1Q9NZ71 1219 aa28.99■■■□□ 2.23
VEGFA-232ENST00000640653 CNTNAP5Q8WYK1 1306 aa28.98■■■□□ 2.23
VEGFA-232ENST00000640653 GOLGA8AA7E2F4 631 aa28.98■■■□□ 2.23
VEGFA-232ENST00000640653 GOLGA8BA8MQT2 603 aa28.98■■■□□ 2.23
VEGFA-232ENST00000640653 SPATA31C2B4DYI2 1134 aa28.98■■■□□ 2.23
VEGFA-232ENST00000640653 DNAJB2P25686 324 aa28.98■■■□□ 2.23
VEGFA-232ENST00000640653 RFC2P35250 354 aa28.98■■■□□ 2.23
VEGFA-232ENST00000640653 RCAN1P53805 252 aa28.98■■■□□ 2.23
VEGFA-232ENST00000640653 KIAA0753Q2KHM9 967 aa28.98■■■□□ 2.23
VEGFA-232ENST00000640653 JAKMIP1Q96N16 626 aaKnown RBP28.98■■■□□ 2.23
VEGFA-232ENST00000640653 ALG1Q9BT22 464 aa28.98■■■□□ 2.23
VEGFA-232ENST00000640653 GTF2IRD1Q9UHL9 959 aa28.98■■■□□ 2.23
VEGFA-232ENST00000640653 HAS3O00219 553 aa28.97■■■□□ 2.23
VEGFA-232ENST00000640653 GDF6Q6KF10 455 aaPredicted RBP28.97■■■□□ 2.23
VEGFA-232ENST00000640653 OTOP2Q7RTS6 562 aa28.97■■■□□ 2.23
VEGFA-232ENST00000640653 NLRX1Q86UT6 975 aa28.97■■■□□ 2.23
VEGFA-232ENST00000640653 CAGE1Q8TC20 777 aa28.97■■■□□ 2.23
VEGFA-232ENST00000640653 NAP1L2Q9ULW6 460 aaPredicted RBP28.97■■■□□ 2.23
VEGFA-232ENST00000640653 SNX14Q9Y5W7 946 aa28.97■■■□□ 2.23
VEGFA-232ENST00000640653 SPDYE3A6NKU9 549 aa28.96■■■□□ 2.23
VEGFA-232ENST00000640653 NOP56O00567 594 aaKnown RBP28.96■■■□□ 2.23
VEGFA-232ENST00000640653 BLOC1S2Q6QNY1 142 aa28.96■■■□□ 2.23
VEGFA-232ENST00000640653 TTYH1Q9H313 450 aaPredicted RBP28.96■■■□□ 2.23
VEGFA-232ENST00000640653 HDAC6Q9UBN7 1215 aa28.96■■■□□ 2.23
VEGFA-232ENST00000640653 IQCF3P0C7M6 154 aa28.95■■■□□ 2.22
VEGFA-232ENST00000640653 UBE2SQ16763 222 aa28.95■■■□□ 2.22
VEGFA-232ENST00000640653 METTL7BQ6UX53 244 aa28.95■■■□□ 2.22
VEGFA-232ENST00000640653 EHMT1Q9H9B1 1298 aa28.95■■■□□ 2.22
VEGFA-232ENST00000640653 CXXC1Q9P0U4 656 aaPredicted RBP28.95■■■□□ 2.22
VEGFA-232ENST00000640653 MYH7BA7E2Y1 1941 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 hCG_1984214I3L0E3 225 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 CPA1P15085 419 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 NAPAP54920 295 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 FUT2Q10981 343 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 SEMA3FQ13275 785 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 WWC2Q6AWC2 1192 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 PPP1R18Q6NYC8 613 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 Q6ZUG5 572 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 CYFIP1Q7L576 1253 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 DEFB128Q7Z7B8 93 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 TEX2Q8IWB9 1127 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 ZNF713Q8N859 430 aaPredicted RBP28.94■■■□□ 2.22
VEGFA-232ENST00000640653 AFAP1L1Q8TED9 768 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 TIFAQ96CG3 184 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 CDHR1Q96JP9 859 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 CDX2Q99626 313 aaPredicted RBP28.94■■■□□ 2.22
VEGFA-232ENST00000640653 SENP7Q9BQF6 1050 aa28.94■■■□□ 2.22
VEGFA-232ENST00000640653 CCDC196A0A1B0GTZ2 297 aa28.93■■■□□ 2.22
VEGFA-232ENST00000640653 PSMA5P28066 241 aa28.93■■■□□ 2.22
VEGFA-232ENST00000640653 METAP2P50579 478 aaKnown RBP eCLIP28.93■■■□□ 2.227e-12■□□□□ 8.9
VEGFA-232ENST00000640653 GIMAP8Q8ND71 665 aaPredicted RBP28.93■■■□□ 2.22
VEGFA-232ENST00000640653 C16orf70Q9BSU1 422 aa28.93■■■□□ 2.22
VEGFA-232ENST00000640653 PBX4Q9BYU1 374 aa28.93■■■□□ 2.22
VEGFA-232ENST00000640653 PCDHA6Q9UN73 950 aa28.93■■■□□ 2.22
VEGFA-232ENST00000640653 PCDHA8Q9Y5H6 950 aa28.93■■■□□ 2.22
VEGFA-232ENST00000640653 V9GY48 417 aaPredicted RBP28.93■■■□□ 2.22
VEGFA-232ENST00000640653 ZBBXA8MT70 800 aa28.92■■■□□ 2.22
VEGFA-232ENST00000640653 GRXCR1A8MXD5 290 aa28.92■■■□□ 2.22
VEGFA-232ENST00000640653 EPB41L2O43491 1005 aaKnown RBP28.92■■■□□ 2.22
VEGFA-232ENST00000640653 ACTN1P12814 892 aa28.92■■■□□ 2.22
VEGFA-232ENST00000640653 GPRASP2Q96D09 838 aa28.92■■■□□ 2.22
VEGFA-232ENST00000640653 VWCEQ96DN2 955 aa28.92■■■□□ 2.22
VEGFA-232ENST00000640653 CTAGE1Q96RT6 745 aa28.92■■■□□ 2.22
VEGFA-232ENST00000640653 USP26Q9BXU7 913 aa28.92■■■□□ 2.22
VEGFA-232ENST00000640653 BCAS3Q9H6U6 928 aa28.92■■■□□ 2.22
VEGFA-232ENST00000640653 FAM217BQ9NTX9 383 aaPredicted RBP28.92■■■□□ 2.22
VEGFA-232ENST00000640653 MSRAQ9UJ68 235 aa28.92■■■□□ 2.22
VEGFA-232ENST00000640653 SLC4A7Q9Y6M7 1214 aa28.92■■■□□ 2.22
VEGFA-232ENST00000640653 LGALS2P05162 132 aa28.91■■■□□ 2.22
VEGFA-232ENST00000640653 RPS6KB1P23443 525 aa28.91■■■□□ 2.22
VEGFA-232ENST00000640653 CDC27P30260 824 aa28.91■■■□□ 2.22
VEGFA-232ENST00000640653 APOBRQ0VD83 1088 aa28.91■■■□□ 2.22
VEGFA-232ENST00000640653 RAB30Q15771 203 aa28.91■■■□□ 2.22
VEGFA-232ENST00000640653 FBXL16Q8N461 479 aa28.91■■■□□ 2.22
VEGFA-232ENST00000640653 SLC17A8Q8NDX2 589 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms