RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 LMNB1P20700 586 aa12.05□□□□□ -0.48
SCN1B-208ENST00000640135 MXRA7P84157 204 aa12.05□□□□□ -0.48
SCN1B-208ENST00000640135 MTERF2Q49AM1 385 aa12.05□□□□□ -0.48
SCN1B-208ENST00000640135 TYW1BQ6NUM6 668 aa12.05□□□□□ -0.48
SCN1B-208ENST00000640135 EP400NLQ6ZTU2 488 aa12.05□□□□□ -0.48
SCN1B-208ENST00000640135 PNMA8AQ86V59 439 aaPredicted RBP12.05□□□□□ -0.48
SCN1B-208ENST00000640135 CCDC105Q8IYK2 499 aa12.05□□□□□ -0.48
SCN1B-208ENST00000640135 KIAA1586Q9HCI6 787 aa12.05□□□□□ -0.48
SCN1B-208ENST00000640135 GADD45BO75293 160 aaPredicted RBP12.05□□□□□ -0.48
SCN1B-208ENST00000640135 ARMCX2Q7L311 632 aa12.05□□□□□ -0.48
SCN1B-208ENST00000640135 RCOR1Q9UKL0 485 aa12.05□□□□□ -0.48
SCN1B-208ENST00000640135 CLIC4Q9Y696 253 aa12.05□□□□□ -0.48
SCN1B-208ENST00000640135 TKFCQ3LXA3 575 aa12.05□□□□□ -0.48
SCN1B-208ENST00000640135 P2RX5Q93086 422 aa12.05□□□□□ -0.48
SCN1B-208ENST00000640135 SELENOSQ9BQE4 189 aa12.05□□□□□ -0.48
SCN1B-208ENST00000640135 CNOT7Q9UIV1 285 aaKnown RBP12.05□□□□□ -0.48
SCN1B-208ENST00000640135 K7ERI5 159 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 CRCPO75575 148 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 ABL1P00519 1130 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 TERF1P54274 439 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 FOXO4P98177 505 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 TNFAIP2Q03169 654 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 MKRN3Q13064 507 aaKnown RBP12.04□□□□□ -0.48
SCN1B-208ENST00000640135 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 RASGRP4Q8TDF6 673 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 ERO1AQ96HE7 468 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 CEP63Q96MT8 703 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 APOL6Q9BWW8 343 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 TOPORSQ9NS56 1045 aaPredicted RBP12.04□□□□□ -0.48
SCN1B-208ENST00000640135 CALCOCO1Q9P1Z2 691 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 DIP2AQ14689 1571 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 GOLGA8CPA6NN73 597 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 F5H6K3 240 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 CACNB3P54284 484 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 KLRC3Q07444 240 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 MTMR1Q13613 665 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 MTMR3Q13615 1198 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 ERCC6LQ2NKX8 1250 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 RUFY4Q6ZNE9 571 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 RSRC2Q7L4I2 434 aaKnown RBP12.04□□□□□ -0.48
SCN1B-208ENST00000640135 HDXQ7Z353 690 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 DAAM2Q86T65 1068 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 UBLCP1Q8WVY7 318 aaPredicted RBP12.04□□□□□ -0.48
SCN1B-208ENST00000640135 ZNF512BQ96KM6 892 aaPredicted RBP12.04□□□□□ -0.48
SCN1B-208ENST00000640135 CLIC6Q96NY7 704 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 KCNH4Q9UQ05 1017 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 THAP12O43422 761 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 AFPP02771 609 aaKnown RBP12.04□□□□□ -0.48
SCN1B-208ENST00000640135 PFKFB3Q16875 520 aaPredicted RBP12.04□□□□□ -0.48
SCN1B-208ENST00000640135 ATRIPQ8WXE1 791 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 RSAD2Q8WXG1 361 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 TRERF1Q96PN7 1200 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 RBSNQ9H1K0 784 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 HAUS4Q9H6D7 363 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 KCNK9Q9NPC2 374 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 PCDHA6Q9UN73 950 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 PCDHA8Q9Y5H6 950 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 GMNNO75496 209 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 PLA2G4BP0C869 781 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 ELF1P32519 619 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 STAT3P40763 770 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 NDUFA8P51970 172 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 SLC12A2P55011 1212 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 PAK2Q13177 524 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 ZNF658Q5TYW1 1059 aaPredicted RBP12.04□□□□□ -0.48
SCN1B-208ENST00000640135 EEPD1Q7L9B9 569 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 MICALL2Q8IY33 904 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 P3H4Q92791 437 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 DISC1Q9NRI5 854 aa12.04□□□□□ -0.48
SCN1B-208ENST00000640135 TECPR2O15040 1411 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 EIF3CLB5ME19 914 aaKnown RBP12.03□□□□□ -0.48
SCN1B-208ENST00000640135 RHOXF2BP0C7M4 288 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 KRT10P13645 584 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 GRM4Q14833 912 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 MAN2A1Q16706 1144 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 LINC00301Q8NCQ3 95 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 EIF3CQ99613 913 aaKnown RBP12.03□□□□□ -0.48
SCN1B-208ENST00000640135 RHOXF2Q9BQY4 288 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 XPO4Q9C0E2 1151 aaKnown RBP12.03□□□□□ -0.48
SCN1B-208ENST00000640135 RPF1Q9H9Y2 349 aaKnown RBP12.03□□□□□ -0.48
SCN1B-208ENST00000640135 PCDHA5Q9Y5H7 936 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 SETDB1Q15047 1291 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 CATSPER4Q7RTX7 472 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 SMC1BQ8NDV3 1235 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 CCDC110Q8TBZ0 833 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 ATP2A3Q93084 1043 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 MXD3Q9BW11 206 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.03□□□□□ -0.48
SCN1B-208ENST00000640135 PREX1Q8TCU6 1659 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 CHRNA5P30532 468 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 PHKA2P46019 1235 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 POLR2FP61218 127 aaKnown RBP12.03□□□□□ -0.48
SCN1B-208ENST00000640135 SCYL2Q6P3W7 929 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 RUNDC3BQ96NL0 473 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 A6NJR5 290 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 CSF1RP07333 972 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 HDLBPQ00341 1268 aaKnown RBP12.03□□□□□ -0.48
SCN1B-208ENST00000640135 RINT1Q6NUQ1 792 aa12.03□□□□□ -0.48
SCN1B-208ENST00000640135 BBOF1Q8ND07 529 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms