RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-223ENST00000640091 ZNF577Q9BSK1 485 aa11.77□□□□□ -0.52
NECAP1-223ENST00000640091 TUBE1Q9UJT0 475 aa11.77□□□□□ -0.52
NECAP1-223ENST00000640091 RABGAP1Q9Y3P9 1069 aa11.77□□□□□ -0.52
NECAP1-223ENST00000640091 PASKQ96RG2 1323 aa11.77□□□□□ -0.53
NECAP1-223ENST00000640091 TESPA1A2RU30 521 aaPredicted RBP11.77□□□□□ -0.53
NECAP1-223ENST00000640091 CHMP2AO43633 222 aa11.77□□□□□ -0.53
NECAP1-223ENST00000640091 FSTL1Q12841 308 aa11.77□□□□□ -0.53
NECAP1-223ENST00000640091 CUL4BQ13620 913 aa11.77□□□□□ -0.53
NECAP1-223ENST00000640091 DPCR1Q3MIW9 517 aa11.77□□□□□ -0.53
NECAP1-223ENST00000640091 ELOA2Q8IYF1 753 aaPredicted RBP11.77□□□□□ -0.53
NECAP1-223ENST00000640091 ANKRD13CQ8N6S4 541 aa11.77□□□□□ -0.53
NECAP1-223ENST00000640091 NSUN6Q8TEA1 469 aaKnown RBP11.77□□□□□ -0.53
NECAP1-223ENST00000640091 CDK5RAP3Q96JB5 506 aa11.77□□□□□ -0.53
NECAP1-223ENST00000640091 LOC285556D6RIA3 1793 aa11.77□□□□□ -0.53
NECAP1-223ENST00000640091 PCNTO95613 3336 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 DDX39AO00148 427 aaKnown RBP11.76□□□□□ -0.53
NECAP1-223ENST00000640091 IPO5O00410 1097 aaKnown RBP11.76□□□□□ -0.53
NECAP1-223ENST00000640091 EML1O00423 815 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 PGK2P07205 417 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 CCT6AP40227 531 aaKnown RBP11.76□□□□□ -0.53
NECAP1-223ENST00000640091 ZNF165P49910 485 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 ERVK-9P63128 1117 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 ERVK-24P63145 666 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 STX1AQ16623 288 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 L1TD1Q5T7N2 865 aaKnown RBP11.76□□□□□ -0.53
NECAP1-223ENST00000640091 LRCH2Q5VUJ6 765 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 OTOP1Q7RTM1 612 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 KCNK18Q7Z418 384 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 LUZP1Q86V48 1076 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 VSIG10LQ86VR7 867 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 SLC5A5Q92911 643 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 SMARCE1Q969G3 411 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 PYM1Q9BRP8 204 aaKnown RBP11.76□□□□□ -0.53
NECAP1-223ENST00000640091 PORCNQ9H237 461 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 ANO10Q9NW15 660 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 USP25Q9UHP3 1055 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 VAV3Q9UKW4 847 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 PNMA3Q9UL41 463 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 UBIAD1Q9Y5Z9 338 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 ASTN1O14525 1302 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 FRMPD4Q14CM0 1322 aa11.76□□□□□ -0.53
NECAP1-223ENST00000640091 GAS7O60861 476 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 PSMD10O75832 226 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 BMP6P22004 513 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 SARSP49591 514 aaKnown RBP11.75□□□□□ -0.53
NECAP1-223ENST00000640091 DPYDQ12882 1025 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 MTMR1Q13613 665 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 RGMBQ6NW40 437 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 ANKRD23Q86SG2 305 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 CATSPER3Q86XQ3 398 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 RASAL3Q86YV0 1011 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 CCDC34Q96HJ3 373 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 EFCC1Q9HA90 598 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 CBX8Q9HC52 389 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 JADE2Q9NQC1 790 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 FBXO40Q9UH90 709 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 KIAA1024Q9UPX6 916 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 POTEB3A0JP26 581 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 ATP9AO75110 1047 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 MED24O75448 989 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
NECAP1-223ENST00000640091 SLC25A27O95847 323 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 NLRP12P59046 1061 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 SETQ01105 290 aaPredicted RBP11.75□□□□□ -0.53
NECAP1-223ENST00000640091 CYP4A11Q02928 519 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 GRM1Q13255 1194 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 POTEBQ6S5H4 581 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 SPATA20Q8TB22 786 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 FAM200AQ8TCP9 573 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 BLOC1S4Q9NUP1 217 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 RGL1Q9NZL6 768 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 MAN1B1Q9UKM7 699 aa11.75□□□□□ -0.53
NECAP1-223ENST00000640091 ABT1Q9ULW3 272 aaKnown RBP11.75□□□□□ -0.53
NECAP1-223ENST00000640091 POTEB2H3BUK9 544 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 RGS20O76081 388 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 CCND2P30279 289 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 ITGB3BPQ13352 177 aaPredicted RBP11.74□□□□□ -0.53
NECAP1-223ENST00000640091 MCM6Q14566 821 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 NT5DC1Q5TFE4 455 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 GPRC5AQ8NFJ5 357 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 AGO4Q9HCK5 861 aaKnown RBP11.74□□□□□ -0.53
NECAP1-223ENST00000640091 KBTBD4Q9NVX7 518 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 SOWAHBA6NEL2 793 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 E9PMD0 336 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 IGF2BP3O00425 579 aaKnown RBP eCLIP11.74□□□□□ -0.53
NECAP1-223ENST00000640091 DHX15O43143 795 aaKnown RBP11.74□□□□□ -0.53
NECAP1-223ENST00000640091 SMC2O95347 1197 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 SPATA31C1P0DKV0 1188 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 BCRP11274 1271 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 PSMC6P62333 389 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 SMC1BQ8NDV3 1235 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 UNC45AQ9H3U1 944 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 BCAS3Q9H6U6 928 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 SLC45A1Q9Y2W3 748 aa11.74□□□□□ -0.53
NECAP1-223ENST00000640091 PFASO15067 1338 aa11.73□□□□□ -0.53
NECAP1-223ENST00000640091 POTEFA5A3E0 1075 aa11.73□□□□□ -0.53
NECAP1-223ENST00000640091 GTPBP6O43824 516 aaPredicted RBP11.73□□□□□ -0.53
NECAP1-223ENST00000640091 PLCB2Q00722 1185 aa11.73□□□□□ -0.53
NECAP1-223ENST00000640091 CTTNQ14247 550 aaKnown RBP11.73□□□□□ -0.53
NECAP1-223ENST00000640091 KCTD2Q14681 263 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms