RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 TRPM7Q96QT4 1865 aa9.14□□□□□ -0.95
SCARB2-220ENST00000640076 PTPRFP10586 1907 aa9.14□□□□□ -0.95
SCARB2-220ENST00000640076 PRPF3O43395 683 aaKnown RBP9.14□□□□□ -0.95
SCARB2-220ENST00000640076 CELF2O95319 508 aaKnown RBP9.14□□□□□ -0.95
SCARB2-220ENST00000640076 BMP3P12645 472 aa9.14□□□□□ -0.95
SCARB2-220ENST00000640076 EIF4BP23588 611 aaKnown RBP9.14□□□□□ -0.95
SCARB2-220ENST00000640076 BACE1P56817 501 aa9.14□□□□□ -0.95
SCARB2-220ENST00000640076 FKBP1BP68106 108 aa9.14□□□□□ -0.95
SCARB2-220ENST00000640076 NFX1Q12986 1120 aaKnown RBP9.14□□□□□ -0.95
SCARB2-220ENST00000640076 TTBK2Q6IQ55 1244 aa9.14□□□□□ -0.95
SCARB2-220ENST00000640076 RNF19BQ6ZMZ0 732 aa9.14□□□□□ -0.95
SCARB2-220ENST00000640076 KIAA0907Q7Z7F0 614 aaPredicted RBP9.14□□□□□ -0.95
SCARB2-220ENST00000640076 SH3TC2Q8TF17 1288 aa9.14□□□□□ -0.95
SCARB2-220ENST00000640076 SCG3Q8WXD2 468 aaKnown RBP9.14□□□□□ -0.95
SCARB2-220ENST00000640076 LPAR1Q92633 364 aa9.14□□□□□ -0.95
SCARB2-220ENST00000640076 AIFM3Q96NN9 605 aa9.14□□□□□ -0.95
SCARB2-220ENST00000640076 DEPDC7Q96QD5 511 aa9.14□□□□□ -0.95
SCARB2-220ENST00000640076 AFG3L2Q9Y4W6 797 aa9.14□□□□□ -0.95
SCARB2-220ENST00000640076 RPS6KL1Q9Y6S9 549 aa9.14□□□□□ -0.95
SCARB2-220ENST00000640076 V9GY48 417 aaPredicted RBP9.14□□□□□ -0.95
SCARB2-220ENST00000640076 hCG_1642624A0A1W2PR95 340 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 TRIM75PA6NK02 468 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 TNFRSF10BO14763 440 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 STX6O43752 255 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 DEXIO95424 95 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 GYS2P54840 703 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 AKAP17AQ02040 695 aaKnown RBP9.13□□□□□ -0.95
SCARB2-220ENST00000640076 PKN1Q16512 942 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 FAM83BQ5T0W9 1011 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 LARP1BQ659C4 914 aaKnown RBP9.13□□□□□ -0.95
SCARB2-220ENST00000640076 KRBA2Q6ZNG9 492 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 ZBTB33Q86T24 672 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 ERO1BQ86YB8 467 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 GJD3Q8N144 294 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 WASF1Q92558 559 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 ALG1Q9BT22 464 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 RIOX1Q9H6W3 641 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 ELP3Q9H9T3 547 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 GBA2Q9HCG7 927 aaPredicted RBP9.13□□□□□ -0.95
SCARB2-220ENST00000640076 KIAA1468Q9P260 1216 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 PNMA2Q9UL42 364 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 ISY1Q9ULR0 285 aaKnown RBP9.13□□□□□ -0.95
SCARB2-220ENST00000640076 ZDHHC9Q9Y397 364 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 FAM221BA6H8Z2 402 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 C19orf81C9J6K1 198 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 KLF4O43474 513 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 SLC16A2P36021 539 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 USP14P54578 494 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 NUCB2P80303 420 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 PPATQ06203 517 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 DGKZQ13574 1117 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 RAB33AQ14088 237 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 PUS10Q3MIT2 529 aaKnown RBP9.13□□□□□ -0.95
SCARB2-220ENST00000640076 CST9Q5W186 159 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 BTNL9Q6UXG8 535 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 ANKS3Q6ZW76 656 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 PIBF1Q8WXW3 757 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 C12orf42Q96LP6 360 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 TRIM55Q9BYV6 548 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 ZNF358Q9NW07 568 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 MTMR6Q9Y217 621 aa9.13□□□□□ -0.95
SCARB2-220ENST00000640076 WDR33Q9C0J8 1336 aaKnown RBP9.13□□□□□ -0.95
SCARB2-220ENST00000640076 TMEM232C9JQI7 657 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 WDR46O15213 610 aaKnown RBP9.12□□□□□ -0.95
SCARB2-220ENST00000640076 VCAM1P19320 739 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 STAT2P52630 851 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 HMGCS2P54868 508 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 PFKFB3Q16875 520 aaPredicted RBP9.12□□□□□ -0.95
SCARB2-220ENST00000640076 CCSAPQ6IQ19 270 aaPredicted RBP9.12□□□□□ -0.95
SCARB2-220ENST00000640076 ADGRF4Q8IZF3 695 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 C2orf69Q8N8R5 385 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 RELTQ969Z4 430 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 OTUD5Q96G74 571 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 C8orf76Q96K31 380 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 CEP89Q96ST8 783 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 JMJD4Q9H9V9 463 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 VAT1LQ9HCJ6 419 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.12□□□□□ -0.95
SCARB2-220ENST00000640076 GJB4Q9NTQ9 266 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 VPS37CA5D8V6 355 aaPredicted RBP9.12□□□□□ -0.95
SCARB2-220ENST00000640076 H3BQV1 296 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 PLA2G6O60733 806 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 ZSCAN22P10073 491 aaPredicted RBP9.12□□□□□ -0.95
SCARB2-220ENST00000640076 SCG2P13521 617 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 GUCY1B3Q02153 619 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 IKQ13123 557 aaPredicted RBP9.12□□□□□ -0.95
SCARB2-220ENST00000640076 PPIL2Q13356 520 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 IFFO2Q5TF58 517 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 OTUD7BQ6GQQ9 843 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 BLOC1S3Q6QNY0 202 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 RINLQ6ZS11 566 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 HOMER1Q86YM7 354 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 FBXO18Q8NFZ0 1043 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 OPTNQ96CV9 577 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 MTMR8Q96EF0 704 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 RRP36Q96EU6 259 aaKnown RBP9.12□□□□□ -0.95
SCARB2-220ENST00000640076 PIGSQ96S52 555 aa9.12□□□□□ -0.95
SCARB2-220ENST00000640076 PASKQ96RG2 1323 aa9.11□□□□□ -0.95
SCARB2-220ENST00000640076 NR1I2O75469 434 aa9.11□□□□□ -0.95
SCARB2-220ENST00000640076 JUNDP17535 347 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms