RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-223ENST00000640001 EMILIN3Q9NT22 766 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 KBTBD4Q9NVX7 518 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 COL4A3BPQ9Y5P4 624 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 GAKO14976 1311 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 AHDC1Q5TGY3 1603 aaPredicted RBP8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 SFI1A8K8P3 1242 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 KRT13P13646 458 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 TUBB2AQ13885 445 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 WHAMMP3Q1A5X7 153 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 SMAP1Q8IYB5 467 aaPredicted RBP8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 TTLL6Q8N841 843 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 PIGOQ8TEQ8 1089 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 TUBB2BQ9BVA1 445 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 GLI3P10071 1580 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 PVALEFA0A1B0GWK0 134 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 SMARCA1P28370 1054 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 EIF4A3P38919 411 aaKnown RBP8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 LMAN1P49257 510 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 CYP2J2P51589 502 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 GRB10Q13322 594 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 CTTNQ14247 550 aaKnown RBP8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 PTPROQ16827 1216 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 ZFYVE27Q5T4F4 411 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 RETREG2Q8NC44 543 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 LRRN4CLQ8ND94 238 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 RABGGTAQ92696 567 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.56□□□□□ -1.046e-7■■■■■ 71.6
HNRNPU-223ENST00000640001 AGPAT5Q9NUQ2 364 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 TRIM10Q9UDY6 481 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 CCPG1Q9ULG6 757 aa8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 MRPL11Q9Y3B7 192 aaKnown RBP8.56□□□□□ -1.04
HNRNPU-223ENST00000640001 CCDC66A2RUB6 948 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 CLIC2O15247 247 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 PRPF6O94906 941 aaKnown RBP8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 XRCC5P13010 732 aaKnown RBP8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 LRRC63Q05C16 580 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 CETN1Q12798 172 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 ORC2Q13416 577 aaPredicted RBP8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 PRKG1Q13976 671 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 APOBEC3HQ6NTF7 200 aaKnown RBP8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 LEKR1Q6ZMV7 388 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 PARD6BQ9BYG5 372 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 PLEKHA4Q9H4M7 779 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 MKRN1Q9UHC7 482 aaKnown RBP8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 TFR2Q9UP52 801 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 RASSF7Q02833 373 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 AP3B2Q13367 1082 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 HLTFQ14527 1009 aaKnown RBP eCLIP8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 TMEM132AQ24JP5 1023 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 TBC1D10BQ4KMP7 808 aaPredicted RBP8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 GUF1Q8N442 669 aaKnown RBP8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 NOX5Q96PH1 765 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 FRMD4BQ9Y2L6 1034 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 GNA14O95837 355 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 TBX2Q13207 712 aaPredicted RBP8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 PDIA5Q14554 519 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 NAALADL2Q58DX5 795 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 MCTP2Q6DN12 878 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 PRMT6Q96LA8 375 aaPredicted RBP8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 MTRQ99707 1265 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 NYAP2Q9P242 653 aa8.55□□□□□ -1.04
HNRNPU-223ENST00000640001 EXOC3O60645 756 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 SRGAP2O75044 1071 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 TADA3O75528 432 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 ERVK-24P63145 666 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 PSMD2Q13200 908 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 TTI2Q6NXR4 508 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 KRT26Q7Z3Y9 468 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 SFR1Q86XK3 245 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 ZDHHC15Q96MV8 337 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 NUDT12Q9BQG2 462 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 VPS18Q9P253 973 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 ITIH6Q6UXX5 1313 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 A0A1W2PQC6 194 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 ZMYND10O75800 440 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 FLOT1O75955 427 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 POLD1P28340 1107 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 SHROOM1Q2M3G4 852 aaPredicted RBP8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 WDR78Q5VTH9 848 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 HDXQ7Z353 690 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 MIER3Q7Z3K6 550 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 FAM178BQ8IXR5 827 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 C4orf32Q8N8J7 132 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 SPATA20Q8TB22 786 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 TBC1D5Q92609 795 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 BICD1Q96G01 975 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 ZNF577Q9BSK1 485 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 HDAC6Q9UBN7 1215 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 BCS1LQ9Y276 419 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 MRFAP1Q9Y605 127 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 OAS2P29728 719 aaKnown RBP8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 BAG6P46379 1132 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 FXR2P51116 673 aaKnown RBP eCLIP8.54□□□□□ -1.043e-11■□□□□ 9.5
HNRNPU-223ENST00000640001 KIF11P52732 1056 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 IQCDQ96DY2 449 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 MED15Q96RN5 788 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 RGL1Q9NZL6 768 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 CAPN11Q9UMQ6 739 aa8.54□□□□□ -1.04
HNRNPU-223ENST00000640001 MYH3P11055 1940 aa8.53□□□□□ -1.04
HNRNPU-223ENST00000640001 LRRC53A6NM62 1247 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms