RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 RABGGTBP53611 331 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 MKRN4PQ13434 485 aaPredicted RBP9.08□□□□□ -0.96
PNKP-229ENST00000637897 MBTPS1Q14703 1052 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 TSGA10IPQ3SY00 556 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 CELF3Q5SZQ8 465 aaKnown RBP9.08□□□□□ -0.96
PNKP-229ENST00000637897 ZNF697Q5TEC3 545 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 RALYLQ86SE5 291 aaKnown RBP9.08□□□□□ -0.96
PNKP-229ENST00000637897 SGMS1Q86VZ5 419 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 FCHSD1Q86WN1 690 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 TMEM199Q8N511 208 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 INPP4AQ96PE3 977 aaPredicted RBP9.08□□□□□ -0.96
PNKP-229ENST00000637897 MTA3Q9BTC8 594 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 HDAC6Q9UBN7 1215 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 TTC28Q96AY4 2481 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 EPOPA6NHQ4 379 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 GCOM1H8Y6P7 765 aaPredicted RBP9.07□□□□□ -0.96
PNKP-229ENST00000637897 NBNO60934 754 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 ATP9AO75110 1047 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 POLR2MP0CAP2 368 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 SMARCA1P28370 1054 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 CDC27P30260 824 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 ICAM3P32942 547 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 MCM5P33992 734 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 PSEN2P49810 448 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 RBL2Q08999 1139 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 TMTC3Q6ZXV5 915 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 CATIPQ7Z7H3 387 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 SAMD3Q8N6K7 520 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 PPTC7Q8NI37 304 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 TIFAQ96CG3 184 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 SEZ6LQ9BYH1 1024 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 ZNF576Q9H609 170 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 ANO2Q9NQ90 1003 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 PRDM6Q9NQX0 595 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 MAP3K20Q9NYL2 800 aaKnown RBP9.07□□□□□ -0.96
PNKP-229ENST00000637897 RTEL1Q9NZ71 1219 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 GTF2IRD1Q9UHL9 959 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 MRVI1Q9Y6F6 885 aa9.07□□□□□ -0.96
PNKP-229ENST00000637897 CNTNAP5Q8WYK1 1306 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 TMEM265A0A087WTH1 108 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 SPATA31C2B4DYI2 1134 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 PIK3CDO00329 1044 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 EDIL3O43854 480 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 KPNA6O60684 536 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 GGPS1O95749 300 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 FGBP02675 491 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 ITGB5P18084 799 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 PTPN11Q06124 597 aaPredicted RBP9.06□□□□□ -0.96
PNKP-229ENST00000637897 UBE2SQ16763 222 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 FAM47CQ5HY64 1035 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 PSRC1Q6PGN9 363 aaPredicted RBP9.06□□□□□ -0.96
PNKP-229ENST00000637897 APOA5Q6Q788 366 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 TMCO2Q7Z6W1 182 aaPredicted RBP9.06□□□□□ -0.96
PNKP-229ENST00000637897 DEFB128Q7Z7B8 93 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 CCDC82Q8N4S0 544 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 FANCBQ8NB91 859 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 TMEM87BQ96K49 555 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 NKX2-4Q9H2Z4 354 aa9.06□□□□□ -0.96
PNKP-229ENST00000637897 PRRC2BQ5JSZ5 2229 aaKnown RBP9.05□□□□□ -0.96
PNKP-229ENST00000637897 ERICH2A1L162 156 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 PITPNM1O00562 1244 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 CXCL10P02778 98 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 CKBP12277 381 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 KCNA2P16389 499 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 ADAM17P78536 824 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 LAMC2Q13753 1193 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 MFSD10Q14728 455 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 PTGISQ16647 500 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 KIAA0753Q2KHM9 967 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 WWC2Q6AWC2 1192 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 TRIM50Q86XT4 487 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 MAFAQ8NHW3 353 aaPredicted RBP9.05□□□□□ -0.96
PNKP-229ENST00000637897 CYP2W1Q8TAV3 490 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 NEK1Q96PY6 1258 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 GPR20Q99678 358 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 ALG1Q9BT22 464 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 PRDM12Q9H4Q4 367 aa9.05□□□□□ -0.96
PNKP-229ENST00000637897 XIRP2A4UGR9 3374 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 GSTTP1A0A1W2PQM5 241 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 RFXAPO00287 272 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 PPFIA4O75335 1185 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 LGALS2P05162 132 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 SUPT20HL2P0C7V6 817 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 TGFB3P10600 412 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 CASTP20810 708 aaKnown RBP9.04□□□□□ -0.96
PNKP-229ENST00000637897 CCND2P30279 289 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 CHMP4BP1P59074 171 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 SART3Q15020 963 aaKnown RBP9.04□□□□□ -0.96
PNKP-229ENST00000637897 DGKDQ16760 1214 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 PCNX4Q63HM2 1172 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 CASC1Q6TDU7 716 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 CYFIP1Q7L576 1253 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 DHX32Q7L7V1 743 aaKnown RBP9.04□□□□□ -0.96
PNKP-229ENST00000637897 MICU3Q86XE3 530 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 DHX37Q8IY37 1157 aaKnown RBP9.04□□□□□ -0.96
PNKP-229ENST00000637897 CTCFLQ8NI51 663 aaPredicted RBP9.04□□□□□ -0.96
PNKP-229ENST00000637897 PGBD1Q96JS3 809 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 SPATA33Q96N06 139 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 PCYT2Q99447 389 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 COL25A1Q9BXS0 654 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms