RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 ATP8A2Q9NTI2 1148 aa22.27■■□□□ 1.15
CACNA1A-243ENST00000637616 TMOD1P28289 359 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 TNFRSF8P28908 595 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 SF3B2Q13435 895 aaKnown RBP22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 UBE4AQ14139 1066 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 KIAA0753Q2KHM9 967 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 USP17L2Q6R6M4 530 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 RUBCNQ92622 972 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 AK8Q96MA6 479 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 SAP30BPQ9UHR5 308 aaKnown RBP22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 A0A087X0T9 212 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 FAM228BP0C875 321 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 SF3A3Q12874 501 aaKnown RBP eCLIP22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 FAM83BQ5T0W9 1011 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 LRRC55Q6ZSA7 311 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 SLC51AQ86UW1 340 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 PNMA5Q96PV4 448 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 TMEM47Q9BQJ4 181 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 CCDC87Q9NVE4 849 aa22.26■■□□□ 1.15
CACNA1A-243ENST00000637616 LAD1O00515 517 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 NOL4O94818 638 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 MAP2K2P36507 400 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 RAPGEF1Q13905 1077 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 SLC9C1Q4G0N8 1177 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 GLE1Q53GS7 698 aaKnown RBP22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 NEK8Q86SG6 692 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 TXNRD3Q86VQ6 643 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 DGKHQ86XP1 1220 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 LSM14BQ9BX40 385 aaKnown RBP22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 ATP2C2O75185 946 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 ITGB3BPQ13352 177 aaPredicted RBP22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 SFMBT2Q5VUG0 894 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 CDK5RAP3Q96JB5 506 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 AP1M1Q9BXS5 423 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 TRAF5O00463 557 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 HSPA2P54652 639 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 CCDC40Q4G0X9 1142 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 NELFCDQ8IXH7 590 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 FAM133AQ8N9E0 248 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 FGFBP2Q9BYJ0 223 aa22.25■■□□□ 1.15
CACNA1A-243ENST00000637616 KCNK3O14649 394 aa22.24■■□□□ 1.15
CACNA1A-243ENST00000637616 SSBP05455 408 aaKnown RBP eCLIP22.24■■□□□ 1.15
CACNA1A-243ENST00000637616 CACNB1Q02641 598 aaPredicted RBP22.24■■□□□ 1.15
CACNA1A-243ENST00000637616 SPRED3Q2MJR0 410 aa22.24■■□□□ 1.15
CACNA1A-243ENST00000637616 LARP4BQ92615 738 aaKnown RBP22.24■■□□□ 1.15
CACNA1A-243ENST00000637616 DDX12PQ92771 950 aa22.24■■□□□ 1.15
CACNA1A-243ENST00000637616 UBA5Q9GZZ9 404 aa22.24■■□□□ 1.15
CACNA1A-243ENST00000637616 FSBPO95073 299 aa22.24■■□□□ 1.15
CACNA1A-243ENST00000637616 PARP10Q53GL7 1025 aa22.24■■□□□ 1.15
CACNA1A-243ENST00000637616 UNC13DQ70J99 1090 aa22.24■■□□□ 1.15
CACNA1A-243ENST00000637616 DAGLBQ8NCG7 672 aa22.24■■□□□ 1.15
CACNA1A-243ENST00000637616 MAGEF1Q9HAY2 307 aa22.24■■□□□ 1.15
CACNA1A-243ENST00000637616 NHSL1Q5SYE7 1610 aa22.23■■□□□ 1.15
CACNA1A-243ENST00000637616 USP8P40818 1118 aa22.23■■□□□ 1.15
CACNA1A-243ENST00000637616 ERVK-9P63128 1117 aa22.23■■□□□ 1.15
CACNA1A-243ENST00000637616 CDC37Q16543 378 aaPredicted RBP22.23■■□□□ 1.15
CACNA1A-243ENST00000637616 RNF10Q8N5U6 811 aaKnown RBP22.23■■□□□ 1.15
CACNA1A-243ENST00000637616 CXorf56Q9H5V9 222 aa22.23■■□□□ 1.15
CACNA1A-243ENST00000637616 SLC37A4O43826 429 aa22.23■■□□□ 1.15
CACNA1A-243ENST00000637616 TDP2O95551 362 aa22.23■■□□□ 1.15
CACNA1A-243ENST00000637616 NAB2Q15742 525 aa22.23■■□□□ 1.15
CACNA1A-243ENST00000637616 C12orf60Q5U649 245 aa22.23■■□□□ 1.15
CACNA1A-243ENST00000637616 SH3RF3Q8TEJ3 882 aaPredicted RBP22.23■■□□□ 1.15
CACNA1A-243ENST00000637616 ZMYND12Q9H0C1 365 aa22.23■■□□□ 1.15
CACNA1A-243ENST00000637616 ACTN3Q08043 901 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 DIXDC1Q155Q3 683 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 CCDC13Q8IYE1 715 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 INPP4AQ96PE3 977 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 GRID2IPA4D2P6 1211 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 FLT3P36888 993 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 MEI1Q5TIA1 1274 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 DZIP1Q86YF9 867 aaKnown RBP22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 ZNF444Q8N0Y2 327 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 PIGSQ96S52 555 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 NEUROG2Q9H2A3 272 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 BSDC1Q9NW68 430 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 HSD17B3P37058 310 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 GNAQP50148 359 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 GSCP56915 257 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 SETQ01105 290 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 QPCTQ16769 361 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 SBK1Q52WX2 424 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 KRT25Q7Z3Z0 450 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 FBXO33Q7Z6M2 555 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 GUF1Q8N442 669 aaKnown RBP22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 LRRC4CQ9HCJ2 640 aa22.22■■□□□ 1.15
CACNA1A-243ENST00000637616 SSU72P8A0A1W2PR75 194 aa22.21■■□□□ 1.15
CACNA1A-243ENST00000637616 PALM3A6NDB9 673 aaPredicted RBP22.21■■□□□ 1.15
CACNA1A-243ENST00000637616 HIBADHP31937 336 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-243ENST00000637616 ECM1Q16610 540 aa22.21■■□□□ 1.15
CACNA1A-243ENST00000637616 ITPK1Q13572 414 aa22.21■■□□□ 1.15
CACNA1A-243ENST00000637616 CALCRLQ16602 461 aa22.21■■□□□ 1.15
CACNA1A-243ENST00000637616 ODF2Q5BJF6 829 aa22.21■■□□□ 1.15
CACNA1A-243ENST00000637616 CHADLQ6NUI6 762 aa22.21■■□□□ 1.15
CACNA1A-243ENST00000637616 MICALCLQ6ZW33 695 aa22.21■■□□□ 1.15
CACNA1A-243ENST00000637616 USP38Q8NB14 1042 aa22.21■■□□□ 1.15
CACNA1A-243ENST00000637616 TGFBRAP1Q8WUH2 860 aa22.21■■□□□ 1.15
CACNA1A-243ENST00000637616 CYFIP2Q96F07 1278 aa22.21■■□□□ 1.15
CACNA1A-243ENST00000637616 A6NNZ2 444 aa22.2■■□□□ 1.14
CACNA1A-243ENST00000637616 DCDC2CA8MYV0 355 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms