RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 DEFB103AP81534 67 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 SP2Q02086 613 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 HIC1Q14526 733 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 PGM5Q15124 567 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 SKIV2LQ15477 1246 aaKnown RBP10.24□□□□□ -0.77
CLN8-214ENST00000637594 HSDL1Q3SXM5 330 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 IFIT1BQ5T764 474 aaKnown RBP10.24□□□□□ -0.77
CLN8-214ENST00000637594 ZNF618Q5T7W0 954 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 KRT40Q6A162 431 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 CHST3Q7LGC8 479 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 SERINC5Q86VE9 423 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 MICALL1Q8N3F8 863 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 NECAB3Q96P71 396 aaPredicted RBP10.24□□□□□ -0.77
CLN8-214ENST00000637594 TGS1Q96RS0 853 aaKnown RBP10.24□□□□□ -0.77
CLN8-214ENST00000637594 UBAC1Q9BSL1 405 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 ZBED2Q9BTP6 218 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 RIOX1Q9H6W3 641 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 SUGCTQ9HAC7 445 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 DIAPH3Q9NSV4 1193 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 INSL6Q9Y581 213 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 PCDHA1Q9Y5I3 950 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 EMSYQ7Z589 1322 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 REV3LO60673 3130 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 LINC01553A4QN01 128 aa10.23□□□□□ -0.77
CLN8-214ENST00000637594 CAND2O75155 1236 aa10.23□□□□□ -0.77
CLN8-214ENST00000637594 LGR5O75473 907 aa10.23□□□□□ -0.77
CLN8-214ENST00000637594 STAM2O75886 525 aa10.23□□□□□ -0.77
CLN8-214ENST00000637594 ICAM3P32942 547 aa10.23□□□□□ -0.77
CLN8-214ENST00000637594 CHMP4BP1P59074 171 aa10.23□□□□□ -0.77
CLN8-214ENST00000637594 HTRA4P83105 476 aaPredicted RBP10.23□□□□□ -0.77
CLN8-214ENST00000637594 ZNF200P98182 395 aaPredicted RBP10.23□□□□□ -0.77
CLN8-214ENST00000637594 MBTPS1Q14703 1052 aa10.23□□□□□ -0.77
CLN8-214ENST00000637594 B4GALNT3Q6L9W6 998 aa10.23□□□□□ -0.77
CLN8-214ENST00000637594 TET1Q8NFU7 2136 aa10.23□□□□□ -0.77
CLN8-214ENST00000637594 SP7Q8TDD2 431 aaPredicted RBP10.23□□□□□ -0.77
CLN8-214ENST00000637594 WNT8BQ93098 351 aa10.23□□□□□ -0.77
CLN8-214ENST00000637594 SPATA33Q96N06 139 aa10.23□□□□□ -0.77
CLN8-214ENST00000637594 ALG1Q9BT22 464 aa10.23□□□□□ -0.77
CLN8-214ENST00000637594 TRANK1O15050 2925 aa10.23□□□□□ -0.77
CLN8-214ENST00000637594 PNMA6FA0A0J9YX94 578 aa10.22□□□□□ -0.77
CLN8-214ENST00000637594 RSPH10B2B2RC85 870 aa10.22□□□□□ -0.77
CLN8-214ENST00000637594 PI4K2BG5E9Z4 385 aa10.22□□□□□ -0.77
CLN8-214ENST00000637594 GCOM1H8Y6P7 765 aaPredicted RBP10.22□□□□□ -0.77
CLN8-214ENST00000637594 DHX16O60231 1041 aaKnown RBP10.22□□□□□ -0.77
CLN8-214ENST00000637594 GPR37L1O60883 481 aa10.22□□□□□ -0.77
CLN8-214ENST00000637594 RSPH10BP0C881 870 aa10.22□□□□□ -0.77
CLN8-214ENST00000637594 POLR2MP0CAP2 368 aa10.22□□□□□ -0.77
CLN8-214ENST00000637594 ZNF286BP0CG31 522 aa10.22□□□□□ -0.77
CLN8-214ENST00000637594 PLA2G5P39877 138 aa10.22□□□□□ -0.77
CLN8-214ENST00000637594 SLC35G1Q2M3R5 365 aa10.22□□□□□ -0.77
CLN8-214ENST00000637594 PLEKHG4Q58EX7 1191 aa10.22□□□□□ -0.77
CLN8-214ENST00000637594 SPRED2Q7Z698 418 aa10.22□□□□□ -0.77
CLN8-214ENST00000637594 TMCO2Q7Z6W1 182 aaPredicted RBP10.22□□□□□ -0.77
CLN8-214ENST00000637594 USP26Q9BXU7 913 aa10.22□□□□□ -0.77
CLN8-214ENST00000637594 PRRC2BQ5JSZ5 2229 aaKnown RBP10.22□□□□□ -0.77
CLN8-214ENST00000637594 TANC1Q9C0D5 1861 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 KIAA1217Q5T5P2 1943 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 TRIP12Q14669 1992 aaPredicted RBP10.21□□□□□ -0.77
CLN8-214ENST00000637594 C17orf102A2RUQ5 167 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 SPATA31C2B4DYI2 1134 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 H3BRB1 525 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 CYTH3O43739 400 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 GGPS1O95749 300 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 AMHP03971 560 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 MYCLP12524 364 aaPredicted RBP10.21□□□□□ -0.77
CLN8-214ENST00000637594 UBA1P22314 1058 aaKnown RBP10.21□□□□□ -0.77
CLN8-214ENST00000637594 SMARCA1P28370 1054 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 CCND2P30279 289 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 HOXA13P31271 388 aaPredicted RBP10.21□□□□□ -0.77
CLN8-214ENST00000637594 ADAM17P78536 824 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 TROAPQ12815 778 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 GRM4Q14833 912 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 LEXMQ3ZCV2 418 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 XRRA1Q6P2D8 792 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.21□□□□□ -0.77
CLN8-214ENST00000637594 CYB5R4Q7L1T6 521 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 DBF4BQ8NFT6 615 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 TOP1MTQ969P6 601 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 SAMD11Q96NU1 681 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 INPP4AQ96PE3 977 aaPredicted RBP10.21□□□□□ -0.77
CLN8-214ENST00000637594 MAP3K14Q99558 947 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 RNPEPQ9H4A4 650 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 EPHX3Q9H6B9 360 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 TUT1Q9H6E5 874 aaKnown RBP10.21□□□□□ -0.77
CLN8-214ENST00000637594 MLXIPQ9HAP2 919 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 RAPGEFL1Q9UHV5 662 aa10.21□□□□□ -0.77
CLN8-214ENST00000637594 FRMPD4Q14CM0 1322 aa10.21□□□□□ -0.78
CLN8-214ENST00000637594 GNAT1P11488 350 aa10.2□□□□□ -0.78
CLN8-214ENST00000637594 THPOP40225 353 aa10.2□□□□□ -0.78
CLN8-214ENST00000637594 MRPS9P82933 396 aaKnown RBP10.2□□□□□ -0.78
CLN8-214ENST00000637594 TRDNQ13061 729 aa10.2□□□□□ -0.78
CLN8-214ENST00000637594 NEDD9Q14511 834 aa10.2□□□□□ -0.78
CLN8-214ENST00000637594 COL19A1Q14993 1142 aa10.2□□□□□ -0.78
CLN8-214ENST00000637594 PUS10Q3MIT2 529 aaKnown RBP10.2□□□□□ -0.78
CLN8-214ENST00000637594 FAM26DQ5JW98 314 aa10.2□□□□□ -0.78
CLN8-214ENST00000637594 METTL7BQ6UX53 244 aa10.2□□□□□ -0.78
CLN8-214ENST00000637594 RPAINQ86UA6 219 aa10.2□□□□□ -0.78
CLN8-214ENST00000637594 IL31RAQ8NI17 732 aa10.2□□□□□ -0.78
CLN8-214ENST00000637594 GDPD5Q8WTR4 605 aa10.2□□□□□ -0.78
CLN8-214ENST00000637594 ATP6V0A1Q93050 837 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms