RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 FBXW10Q5XX13 1052 aa2.68□□□□□ -1.98
SCN1A-215ENST00000637285 RUFY4Q6ZNE9 571 aa2.68□□□□□ -1.98
SCN1A-215ENST00000637285 GPR155Q7Z3F1 870 aa2.68□□□□□ -1.98
SCN1A-215ENST00000637285 MRGPRGQ86SM5 289 aa2.68□□□□□ -1.98
SCN1A-215ENST00000637285 SLITRK4Q8IW52 837 aa2.68□□□□□ -1.98
SCN1A-215ENST00000637285 FUKQ8N0W3 1084 aa2.68□□□□□ -1.98
SCN1A-215ENST00000637285 LARP4BQ92615 738 aaKnown RBP2.68□□□□□ -1.98
SCN1A-215ENST00000637285 EDAQ92838 391 aa2.68□□□□□ -1.98
SCN1A-215ENST00000637285 TOE1Q96GM8 510 aaKnown RBP2.68□□□□□ -1.98
SCN1A-215ENST00000637285 FGD4Q96M96 766 aa2.68□□□□□ -1.98
SCN1A-215ENST00000637285 HAUS7Q99871 368 aa2.68□□□□□ -1.98
SCN1A-215ENST00000637285 GBP3Q9H0R5 595 aa2.68□□□□□ -1.98
SCN1A-215ENST00000637285 MMRN2Q9H8L6 949 aa2.68□□□□□ -1.98
SCN1A-215ENST00000637285 GPRC5CQ9NQ84 441 aa2.68□□□□□ -1.98
SCN1A-215ENST00000637285 CGGBP1Q9UFW8 167 aaPredicted RBP2.68□□□□□ -1.98
SCN1A-215ENST00000637285 ZNF214Q9UL59 606 aaPredicted RBP2.68□□□□□ -1.98
SCN1A-215ENST00000637285 DMRT1Q9Y5R6 373 aa2.68□□□□□ -1.98
SCN1A-215ENST00000637285 RAMP2O60895 175 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 SLC6A11P48066 632 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 RBM10P98175 930 aaKnown RBP2.67□□□□□ -1.98
SCN1A-215ENST00000637285 GNPTABQ3T906 1256 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 HEATR6Q6AI08 1181 aaKnown RBP2.67□□□□□ -1.98
SCN1A-215ENST00000637285 TEPPQ6URK8 271 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 Q6ZUG5 572 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 IFNL2Q8IZJ0 200 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 TAB3Q8N5C8 712 aaPredicted RBP2.67□□□□□ -1.98
SCN1A-215ENST00000637285 ARRDC4Q8NCT1 418 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 FERD3LQ96RJ6 166 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 WRNIP1Q96S55 665 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 TMEM209Q96SK2 561 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 TM9SF2Q99805 663 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 DTLQ9NZJ0 730 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 RBPJLQ9UBG7 517 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 GGT7Q9UJ14 662 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 ZNRF3Q9ULT6 936 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 SUGT1Q9Y2Z0 365 aa2.67□□□□□ -1.98
SCN1A-215ENST00000637285 SUPT5HO00267 1087 aaKnown RBP2.66□□□□□ -1.98
SCN1A-215ENST00000637285 U2SURPO15042 1029 aaKnown RBP2.66□□□□□ -1.98
SCN1A-215ENST00000637285 EPHX1P07099 455 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 IMPDH2P12268 514 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 MAKP20794 623 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 BMP5P22003 454 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 GUCY2CP25092 1073 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 TUBA3CQ13748 450 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 INF2Q27J81 1249 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 MROH9Q5TGP6 573 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 FNDC7Q5VTL7 733 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 LRCH2Q5VUJ6 765 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 TUBA3EQ6PEY2 450 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 CEP68Q76N32 757 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 ZNF627Q7L945 461 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 IL17DQ8TAD2 202 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 ZNF483Q8TF39 744 aaPredicted RBP2.66□□□□□ -1.98
SCN1A-215ENST00000637285 CACTINQ8WUQ7 758 aaKnown RBP2.66□□□□□ -1.98
SCN1A-215ENST00000637285 NEIL1Q96FI4 390 aaPredicted RBP2.66□□□□□ -1.98
SCN1A-215ENST00000637285 TRMT2BQ96GJ1 504 aaKnown RBP2.66□□□□□ -1.98
SCN1A-215ENST00000637285 NT5C1AQ9BXI3 368 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 KLHL25Q9H0H3 589 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 TIMELESSQ9UNS1 1208 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 WASF3Q9UPY6 502 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 REXO2Q9Y3B8 237 aaKnown RBP2.66□□□□□ -1.98
SCN1A-215ENST00000637285 SLC4A7Q9Y6M7 1214 aa2.66□□□□□ -1.98
SCN1A-215ENST00000637285 TCRBV5S2A0A599 114 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 KLHL18O94889 574 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 KCNH1O95259 989 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 LRG1P02750 347 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 COL6A1P12109 1028 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 RPL11P62913 178 aaKnown RBP2.65□□□□□ -1.99
SCN1A-215ENST00000637285 TAGLNQ01995 201 aaKnown RBP2.65□□□□□ -1.99
SCN1A-215ENST00000637285 KCNA1Q09470 495 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 SCRN1Q12765 414 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 GRB10Q13322 594 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 CCDC142Q17RM4 750 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 ZNF568Q3ZCX4 644 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 Q6ZSN1 163 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 ARHGEF39Q8N4T4 335 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 CLIP3Q96DZ5 547 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 FAM89AQ96GI7 184 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 MMP19Q99542 508 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 TTPALQ9BTX7 342 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 PCDHB10Q9UN67 800 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 COA3Q9Y2R0 106 aaPredicted RBP2.65□□□□□ -1.99
SCN1A-215ENST00000637285 PTPN22Q9Y2R2 807 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 PCDHB4Q9Y5E5 795 aa2.65□□□□□ -1.99
SCN1A-215ENST00000637285 HGSO14964 777 aaPredicted RBP2.64□□□□□ -1.99
SCN1A-215ENST00000637285 RAD17O75943 681 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 FBXO21O94952 628 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 ACRV1P26436 265 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 CSF2RBP32927 897 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 BCL6P41182 706 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 GLRBP48167 497 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 RAC3P60763 192 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 MRPS21P82921 87 aaKnown RBP2.64□□□□□ -1.99
SCN1A-215ENST00000637285 FSTL1Q12841 308 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 HS2ST1Q7LGA3 356 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 POLNQ7Z5Q5 900 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 GLCCI1Q86VQ1 547 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 RIOX2Q8IUF8 465 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 KIAA0825Q8IV33 1275 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 TMEM169Q96HH4 297 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms