RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 CTDP1Q9Y5B0 961 aaPredicted RBP17.76■□□□□ 0.43
CACNA1A-231ENST00000636816 MEIS1O00470 390 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 CBFA2T2O43439 604 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 SSBP05455 408 aaKnown RBP eCLIP17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 PSMC6P62333 389 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 MAP3K9P80192 1104 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 TPD52L1Q16890 204 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 CEP55Q53EZ4 464 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 ILDR2Q71H61 639 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 KRT26Q7Z3Y9 468 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 KIAA1524Q8TCG1 905 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 KDM3AQ9Y4C1 1321 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 DSG3P32926 999 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 MOB2Q70IA6 237 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 KIAA0895Q8NCT3 520 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 REPS2Q8NFH8 660 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 SYTL5Q8TDW5 730 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 TRERF1Q96PN7 1200 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 TAAR1Q96RJ0 339 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 NT5C3AQ9H0P0 336 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 EHMT1Q9H9B1 1298 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 SLC39A2Q9NP94 309 aa17.75■□□□□ 0.43
CACNA1A-231ENST00000636816 OTOFQ9HC10 1997 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 WDR90Q96KV7 1748 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 NPHP3-ACAD11A0A0J9YXS1 232 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 RPS6P62753 249 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 CYP4A11Q02928 519 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 DPY19L2Q6NUT2 758 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 ARMCX5Q6P1M9 558 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 CATSPERGQ6ZRH7 1159 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 UNC13DQ70J99 1090 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 OTOP1Q7RTM1 612 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 MCF2L2Q86YR7 1114 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 VSTM4Q8IW00 320 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 DNAJC19Q96DA6 116 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 RGL1Q9NZL6 768 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 IMPACTQ9P2X3 320 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 RPTORQ8N122 1335 aa17.74■□□□□ 0.43
CACNA1A-231ENST00000636816 PSMD10O75832 226 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 PLA2G4BP0C869 781 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 IDEP14735 1019 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 ITGB5P18084 799 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 GHRHRQ02643 423 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 COG2Q14746 738 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 NR1I3Q14994 352 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 SLC5A5Q92911 643 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 CCDC47Q96A33 483 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 TMOD4Q9NZQ9 345 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 ADAMTS5Q9UNA0 930 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 PVALEFA0A1B0GWK0 134 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 TEX33O43247 280 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 RPA1P27694 616 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 GOLGA8FQ08AF8 430 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 GOLGA8DPQ0D2H9 430 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 SEMA3FQ13275 785 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 NOLC1Q14978 699 aaKnown RBP eCLIP17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 LRCH2Q5VUJ6 765 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 GLIS3Q8NEA6 775 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 EIF2AK1Q9BQI3 630 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 MXRA8Q9BRK3 442 aa17.73■□□□□ 0.43
CACNA1A-231ENST00000636816 CHMP2AO43633 222 aa17.72■□□□□ 0.43
CACNA1A-231ENST00000636816 EPHX2P34913 555 aa17.72■□□□□ 0.43
CACNA1A-231ENST00000636816 RAD51AP2Q09MP3 1159 aa17.72■□□□□ 0.43
CACNA1A-231ENST00000636816 TMEM132BQ14DG7 1078 aa17.72■□□□□ 0.43
CACNA1A-231ENST00000636816 GPR162Q16538 588 aa17.72■□□□□ 0.43
CACNA1A-231ENST00000636816 CNNM4Q6P4Q7 775 aa17.72■□□□□ 0.43
CACNA1A-231ENST00000636816 NSMFQ6X4W1 530 aa17.72■□□□□ 0.43
CACNA1A-231ENST00000636816 IRF2BP1Q8IU81 584 aa17.72■□□□□ 0.43
CACNA1A-231ENST00000636816 DUSP9Q99956 384 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-231ENST00000636816 WDR11Q9BZH6 1224 aa17.72■□□□□ 0.43
CACNA1A-231ENST00000636816 RNF146Q9NTX7 359 aa17.72■□□□□ 0.43
CACNA1A-231ENST00000636816 PTPRFP10586 1907 aa17.72■□□□□ 0.43
CACNA1A-231ENST00000636816 PAPPA2Q9BXP8 1791 aa17.72■□□□□ 0.43
CACNA1A-231ENST00000636816 A0A1B0GTH6 734 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 PSMA7O14818 248 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 PEX10O60683 326 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 SLC12A3P55017 1021 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 MRPS9P82933 396 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 CCZ1BP86790 482 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 CCZ1P86791 482 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 ARSHQ5FYA8 562 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 TREML2Q5T2D2 321 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 HAUS3Q68CZ6 603 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 ANKRD40Q6AI12 368 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 SNRNP48Q6IEG0 339 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 TTI2Q6NXR4 508 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 GPBP1Q86WP2 473 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 CREBRFQ8IUR6 639 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 ERMNQ8TAM6 284 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 EEF2KMTQ96G04 330 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 L3MBTL3Q96JM7 780 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 CLMNQ96JQ2 1002 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 ZNF577Q9BSK1 485 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 PKD2L1Q9P0L9 805 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 ZNF214Q9UL59 606 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 RBBP6Q7Z6E9 1792 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 PPP1R12BO60237 982 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 FDX1P10109 184 aa17.71■□□□□ 0.43
CACNA1A-231ENST00000636816 CYP11B2P19099 503 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms