RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ANKS1AQ92625 1134 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 DDX25Q9UHL0 483 aaKnown RBP15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 JRKLQ9Y4A0 524 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 EHHADHQ08426 723 aa15.52■□□□□ 0.08
CACNA1A-228ENST00000636610 KCNMA1Q12791 1236 aa15.52■□□□□ 0.08
CACNA1A-228ENST00000636610 SRLQ86TD4 932 aa15.52■□□□□ 0.08
CACNA1A-228ENST00000636610 TSEN2Q8NCE0 465 aaKnown RBP15.52■□□□□ 0.08
CACNA1A-228ENST00000636610 RAD54LQ92698 747 aa15.52■□□□□ 0.08
CACNA1A-228ENST00000636610 IKZF4Q9H2S9 585 aa15.52■□□□□ 0.08
CACNA1A-228ENST00000636610 CENPHQ9H3R5 247 aa15.52■□□□□ 0.08
CACNA1A-228ENST00000636610 ZNF287Q9HBT7 754 aa15.52■□□□□ 0.08
CACNA1A-228ENST00000636610 PANK4Q9NVE7 773 aa15.52■□□□□ 0.08
CACNA1A-228ENST00000636610 GGA1Q9UJY5 639 aa15.52■□□□□ 0.08
CACNA1A-228ENST00000636610 PCDHAC2Q9Y5I4 1007 aa15.52■□□□□ 0.08
CACNA1A-228ENST00000636610 GOLGA6CA6NDK9 693 aa15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 GOLGA6DP0CG33 693 aa15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 COASYQ13057 564 aa15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 MTMR9Q96QG7 549 aa15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 GOLGA6AQ9NYA3 693 aa15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 SNED1Q8TER0 1413 aa15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 ROBO1Q9Y6N7 1651 aa15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 MUM1L1Q5H9M0 696 aa15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 ZSCAN29Q8IWY8 852 aaPredicted RBP15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 KLHL7Q8IXQ5 586 aa15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 JMJD4Q9H9V9 463 aa15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 MTMR4Q9NYA4 1195 aa15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 ZNF219Q9P2Y4 722 aaPredicted RBP15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 PCDHA12Q9UN75 941 aa15.52■□□□□ 0.07
CACNA1A-228ENST00000636610 STRCQ7RTU9 1775 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 PALMO75781 387 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 KRT14P02533 472 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 MYL1P05976 194 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 PRR5LQ6MZQ0 368 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 CCDC70Q6NSX1 233 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 LRRC55Q6ZSA7 311 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 MYOCDQ8IZQ8 938 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 RETREG2Q8NC44 543 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 ARL8AQ96BM9 186 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 ALS2CR12Q96Q35 445 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 NFU1Q9UMS0 254 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 IRS2Q9Y4H2 1338 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 POTEFA5A3E0 1075 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 TLR2O60603 784 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 FAM153BP0C7A2 387 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 POTEIP0CG38 1075 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 EPS15P42566 896 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 PPP4CP60510 307 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 CYP4A11Q02928 519 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 FAM153CQ494X1 144 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 USH1GQ495M9 461 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 TCERG1LQ5VWI1 586 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 POTEGQ6S5H5 508 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 POTEEQ6S8J3 1075 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 BAP1Q92560 729 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 HAS1Q92839 578 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 TLR10Q9BXR5 811 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 CUEDC2Q9H467 287 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 MED4Q9NPJ6 270 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 FAM153AQ9UHL3 310 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 LEMD3Q9Y2U8 911 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 DAGLAQ9Y4D2 1042 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 SAMM50Q9Y512 469 aa15.51■□□□□ 0.07
CACNA1A-228ENST00000636610 SFI1A8K8P3 1242 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 PRPF6O94906 941 aaKnown RBP15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 KLRC1P26715 233 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 CCT5P48643 541 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 CARSP49589 748 aaKnown RBP15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 GUCY2DQ02846 1103 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 FAM26FQ5R3K3 315 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 FAM83BQ5T0W9 1011 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 C8orf74Q6P047 294 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 TRMT1LQ7Z2T5 733 aaKnown RBP15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 LZTS2Q9BRK4 669 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 RASSF4Q9H2L5 321 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 BCS1LQ9Y276 419 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 ZC3H4Q9UPT8 1303 aaKnown RBP15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 GPR75-ASB3A0A0A6YYF3 556 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 IKQ13123 557 aaPredicted RBP15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 GPBP1Q86WP2 473 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 ZFPM1Q8IX07 1006 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 TSG101Q99816 390 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 PSTPIP2Q9H939 334 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 PSD3Q9NYI0 1048 aa15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 COL14A1Q05707 1796 aaKnown RBP15.5■□□□□ 0.07
CACNA1A-228ENST00000636610 A0A087X0T9 212 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 ZEB2O60315 1214 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 GLI1P08151 1106 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 FAM228BP0C875 321 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 PAFAH1B1P43034 410 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 CASP5P51878 434 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 PSMC6P62333 389 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 PABPC4Q13310 644 aaKnown RBP eCLIP15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 KIAA0753Q2KHM9 967 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 FAM76AQ8TAV0 307 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 KRT12Q99456 494 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 EPB41L5Q9HCM4 733 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 SCN7AQ01118 1682 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 NFIAQ12857 509 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 DCAF17Q5H9S7 520 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms