RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	ADGRA1	Q86SQ6	560 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	RAB11FIP4	Q86YS3	637 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	NDST4	Q9H3R1	872 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	ABHD10	Q9NUJ1	306 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	CEP131	Q9UPN4	1083 aa		11.85	□□□□□ -0.51
CHD2-223	ENST00000636306	ZSCAN9	O15535	394 aa	Predicted RBP	11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	TEX33	O43247	280 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	BBOX1	O75936	387 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	PYGL	P06737	847 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	VAV2	P52735	878 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	ZNF268	Q14587	947 aa	Predicted RBP	11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	LBR	Q14739	615 aa	Known RBP	11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	CRY2	Q49AN0	593 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	PRR5L	Q6MZQ0	368 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	SHC4	Q6S5L8	630 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	CACNA2D4	Q7Z3S7	1137 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	KRT27	Q7Z3Y8	459 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	SH2D3C	Q8N5H7	860 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	ATL2	Q8NHH9	583 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	EPAS1	Q99814	870 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	TSGA10	Q9BZW7	698 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	ZNF287	Q9HBT7	754 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	TFCP2L1	Q9NZI6	479 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	GUCA1B	Q9UMX6	200 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	ROBO3	Q96MS0	1386 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	MYH2	Q9UKX2	1941 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	RGPD4	Q7Z3J3	1758 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	IRS2	Q9Y4H2	1338 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	GOLGA6L10	A0A0M3HER8	536 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	CCT8L1P	A6NM43	557 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	OPLAH	O14841	1288 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	NDUFA10	O95299	355 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	GYPC	P04921	128 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	PYGB	P11216	843 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	PLCG2	P16885	1265 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	KIF5B	P33176	963 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	DYNLL1	P63167	89 aa	Known RBP	11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	SEC23A	Q15436	765 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	FAM182B	Q5T319	152 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	CDKAL1	Q5VV42	579 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	IFT20	Q8IY31	132 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	FANCB	Q8NB91	859 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	CPLX3	Q8WVH0	158 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.84	□□□□□ -0.51	9e-7	■■■■■ 57.1
CHD2-223	ENST00000636306	PHKB	Q93100	1093 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	SLF1	Q9BQI6	1058 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	FOXP1	Q9H334	677 aa	Predicted RBP	11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	QTRT2	Q9H974	415 aa	Known RBP	11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	SAMSN1	Q9NSI8	373 aa	Known RBP	11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	GGA1	Q9UJY5	639 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	BLOC1S6	Q9UL45	172 aa		11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
CHD2-223	ENST00000636306	NRXN2	Q9P2S2	1712 aa		11.83	□□□□□ -0.51
CHD2-223	ENST00000636306	LRRD1	A4D1F6	860 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	KRT86	O43790	486 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	RANBP6	O60518	1105 aa	Known RBP	11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	ABL1	P00519	1130 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	MMP1	P03956	469 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	SERPINB2	P05120	415 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	POLR3D	P05423	398 aa	Predicted RBP	11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	GYS1	P13807	737 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	RXRA	P19793	462 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	RANBP1	P43487	201 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	SFSWAP	Q12872	951 aa	Known RBP	11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	PAK2	Q13177	524 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	BYSL	Q13895	437 aa	Known RBP	11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	PPP1R7	Q15435	360 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	SGSM1	Q2NKQ1	1148 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	RILPL1	Q5EBL4	403 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	RBM41	Q96IZ5	413 aa	Known RBP	11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	CRAMP1	Q96RY5	1269 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	TMBIM4	Q9HC24	238 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	STIM2	Q9P246	746 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	HDAC6	Q9UBN7	1215 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	KCNH3	Q9ULD8	1083 aa		11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
CHD2-223	ENST00000636306	ZNF233	A6NK53	670 aa		11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	PDE2A	O00408	941 aa	Predicted RBP	11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	SMIM24	O75264	130 aa		11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	BMP15	O95972	392 aa		11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	KLRK1	P26718	216 aa		11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	ALDH3A1	P30838	453 aa		11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	HOXA10	P31260	410 aa	Predicted RBP	11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	CTCF	P49711	727 aa	Predicted RBP	11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	FXR1	P51114	621 aa	Known RBP eCLIP	11.82	□□□□□ -0.52	5e-6	■□□□□ 10
CHD2-223	ENST00000636306	MRPS35	P82673	323 aa	Known RBP	11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	C2orf54	Q08AI8	447 aa		11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	BIRC3	Q13489	604 aa		11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	ITIH4	Q14624	930 aa		11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	POSTN	Q15063	836 aa		11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	PTPA	Q15257	358 aa		11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	CCDC96	Q2M329	555 aa		11.82	□□□□□ -0.52
CHD2-223	ENST00000636306	LONRF3	Q496Y0	759 aa		11.82	□□□□□ -0.52

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