RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 LMAN2LQ9H0V9 348 aa21.41■■□□□ 1.02
CLN6-212ENST00000636020 CD207Q9UJ71 328 aa21.41■■□□□ 1.02
CLN6-212ENST00000636020 PNMA2Q9UL42 364 aa21.41■■□□□ 1.02
CLN6-212ENST00000636020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.41■■□□□ 1.02
CLN6-212ENST00000636020 RIF1Q5UIP0 2472 aaKnown RBP21.41■■□□□ 1.02
CLN6-212ENST00000636020 ATG2AQ2TAZ0 1938 aa21.41■■□□□ 1.02
CLN6-212ENST00000636020 TSPY2A6NKD2 308 aa21.4■■□□□ 1.02
CLN6-212ENST00000636020 C5orf67F2Z3F1 127 aa21.4■■□□□ 1.02
CLN6-212ENST00000636020 UPP2O95045 317 aa21.4■■□□□ 1.02
CLN6-212ENST00000636020 F2P00734 622 aa21.4■■□□□ 1.02
CLN6-212ENST00000636020 HIC1Q14526 733 aa21.4■■□□□ 1.02
CLN6-212ENST00000636020 SEPT14Q6ZU15 432 aa21.4■■□□□ 1.02
CLN6-212ENST00000636020 PANK1Q8TE04 598 aa21.4■■□□□ 1.02
CLN6-212ENST00000636020 NACAP1Q9BZK3 213 aa21.4■■□□□ 1.02
CLN6-212ENST00000636020 IRF2BPLQ9H1B7 796 aa21.4■■□□□ 1.02
CLN6-212ENST00000636020 RALGAPA2Q2PPJ7 1873 aa21.39■■□□□ 1.02
CLN6-212ENST00000636020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.39■■□□□ 1.01
CLN6-212ENST00000636020 GRM6O15303 877 aa21.39■■□□□ 1.01
CLN6-212ENST00000636020 RB1P06400 928 aa21.39■■□□□ 1.01
CLN6-212ENST00000636020 ZFYP08048 801 aaPredicted RBP21.39■■□□□ 1.01
CLN6-212ENST00000636020 GTF2F1P35269 517 aaKnown RBP eCLIP21.39■■□□□ 1.014e-9■■■■■ 37.4
CLN6-212ENST00000636020 ATOH1Q92858 354 aaPredicted RBP21.39■■□□□ 1.01
CLN6-212ENST00000636020 INCENPQ9NQS7 918 aa21.39■■□□□ 1.01
CLN6-212ENST00000636020 LOC730098B7Z3J9 87 aa21.38■■□□□ 1.01
CLN6-212ENST00000636020 EYA4O95677 639 aa21.38■■□□□ 1.01
CLN6-212ENST00000636020 CTNNB1P35222 781 aa21.38■■□□□ 1.01
CLN6-212ENST00000636020 THPOP40225 353 aa21.38■■□□□ 1.01
CLN6-212ENST00000636020 VCPP55072 806 aaKnown RBP21.38■■□□□ 1.01
CLN6-212ENST00000636020 ADAM15Q13444 863 aa21.38■■□□□ 1.01
CLN6-212ENST00000636020 SERINC5Q86VE9 423 aa21.38■■□□□ 1.01
CLN6-212ENST00000636020 RGS22Q8NE09 1264 aa21.38■■□□□ 1.01
CLN6-212ENST00000636020 SEPT8Q92599 483 aa21.38■■□□□ 1.01
CLN6-212ENST00000636020 EMID1Q96A84 441 aaPredicted RBP21.38■■□□□ 1.01
CLN6-212ENST00000636020 MSLNLQ96KJ4 702 aa21.38■■□□□ 1.01
CLN6-212ENST00000636020 NAPBQ9H115 298 aa21.38■■□□□ 1.01
CLN6-212ENST00000636020 GPCPD1Q9NPB8 672 aa21.38■■□□□ 1.01
CLN6-212ENST00000636020 WDR19Q8NEZ3 1342 aa21.37■■□□□ 1.01
CLN6-212ENST00000636020 FAM186AA6NE01 2351 aa21.37■■□□□ 1.01
CLN6-212ENST00000636020 LINC01565O15544 149 aa21.37■■□□□ 1.01
CLN6-212ENST00000636020 LINC00271P0C7V0 271 aa21.37■■□□□ 1.01
CLN6-212ENST00000636020 ZNF286BP0CG31 522 aa21.37■■□□□ 1.01
CLN6-212ENST00000636020 BMPR1AP36894 532 aa21.37■■□□□ 1.01
CLN6-212ENST00000636020 CBX2Q14781 532 aaPredicted RBP21.37■■□□□ 1.01
CLN6-212ENST00000636020 C11orf84Q9BUA3 381 aaPredicted RBP21.37■■□□□ 1.01
CLN6-212ENST00000636020 IFIH1Q9BYX4 1025 aaKnown RBP21.37■■□□□ 1.01
CLN6-212ENST00000636020 OSBPL7Q9BZF2 842 aa21.37■■□□□ 1.01
CLN6-212ENST00000636020 IGFLR1Q9H665 355 aa21.37■■□□□ 1.01
CLN6-212ENST00000636020 ECHDC1Q9NTX5 307 aa21.37■■□□□ 1.01
CLN6-212ENST00000636020 DDX41Q9UJV9 622 aaKnown RBP21.37■■□□□ 1.01
CLN6-212ENST00000636020 FRMPD2Q68DX3 1309 aaPredicted RBP21.36■■□□□ 1.01
CLN6-212ENST00000636020 PROB1E7EW31 1015 aa21.36■■□□□ 1.01
CLN6-212ENST00000636020 AVPR2P30518 371 aa21.36■■□□□ 1.01
CLN6-212ENST00000636020 DHX37Q8IY37 1157 aaKnown RBP21.36■■□□□ 1.01
CLN6-212ENST00000636020 FIBCD1Q8N539 461 aa21.36■■□□□ 1.01
CLN6-212ENST00000636020 PPTC7Q8NI37 304 aa21.36■■□□□ 1.01
CLN6-212ENST00000636020 IL17RAQ96F46 866 aa21.36■■□□□ 1.01
CLN6-212ENST00000636020 PLXNA3P51805 1871 aa21.36■■□□□ 1.01
CLN6-212ENST00000636020 HOXD8P13378 290 aaPredicted RBP21.35■■□□□ 1.01
CLN6-212ENST00000636020 SIGLEC14Q08ET2 396 aa21.35■■□□□ 1.01
CLN6-212ENST00000636020 LAMC2Q13753 1193 aa21.35■■□□□ 1.01
CLN6-212ENST00000636020 ASIC4Q96FT7 647 aa21.35■■□□□ 1.01
CLN6-212ENST00000636020 TAAR1Q96RJ0 339 aa21.35■■□□□ 1.01
CLN6-212ENST00000636020 SEC62Q99442 399 aaKnown RBP21.35■■□□□ 1.01
CLN6-212ENST00000636020 DMDP11532 3685 aa21.34■■□□□ 1.01
CLN6-212ENST00000636020 KIAA1217Q5T5P2 1943 aa21.34■■□□□ 1.01
CLN6-212ENST00000636020 CTDSPL2Q05D32 466 aa21.34■■□□□ 1.01
CLN6-212ENST00000636020 STXBP2Q15833 593 aa21.34■■□□□ 1.01
CLN6-212ENST00000636020 ASCL5Q7RTU5 278 aa21.34■■□□□ 1.01
CLN6-212ENST00000636020 ERMP1Q7Z2K6 904 aa21.34■■□□□ 1.01
CLN6-212ENST00000636020 TBC1D5Q92609 795 aa21.34■■□□□ 1.01
CLN6-212ENST00000636020 H0Y858 1186 aa21.33■■□□□ 1.01
CLN6-212ENST00000636020 SMARCA5O60264 1052 aaPredicted RBP21.33■■□□□ 1.01
CLN6-212ENST00000636020 RANBP6O60518 1105 aaKnown RBP21.33■■□□□ 1.01
CLN6-212ENST00000636020 SMRP1Q8NCR6 262 aa21.33■■□□□ 1.01
CLN6-212ENST00000636020 SYTL5Q8TDW5 730 aaPredicted RBP21.33■■□□□ 1.01
CLN6-212ENST00000636020 NSUN6Q8TEA1 469 aaKnown RBP21.33■■□□□ 1.01
CLN6-212ENST00000636020 IWS1Q96ST2 819 aa21.33■■□□□ 1.01
CLN6-212ENST00000636020 TMEM47Q9BQJ4 181 aa21.33■■□□□ 1.01
CLN6-212ENST00000636020 LRRCC1Q9C099 1032 aa21.33■■□□□ 1.01
CLN6-212ENST00000636020 TLR9Q9NR96 1032 aa21.33■■□□□ 1.01
CLN6-212ENST00000636020 ZBTB40Q9NUA8 1239 aa21.33■■□□□ 1.01
CLN6-212ENST00000636020 CLEC1BQ9P126 229 aa21.33■■□□□ 1.01
CLN6-212ENST00000636020 RWDD3Q9Y3V2 267 aa21.33■■□□□ 1.01
CLN6-212ENST00000636020 PPFIA4O75335 1185 aa21.32■■□□□ 1
CLN6-212ENST00000636020 MMP1P03956 469 aa21.32■■□□□ 1
CLN6-212ENST00000636020 PDHBP11177 359 aa21.32■■□□□ 1
CLN6-212ENST00000636020 TOP1P11387 765 aaKnown RBP21.32■■□□□ 1
CLN6-212ENST00000636020 NDUFV1P49821 464 aa21.32■■□□□ 1
CLN6-212ENST00000636020 RRP1P56182 461 aaKnown RBP21.32■■□□□ 1
CLN6-212ENST00000636020 CAMK1Q14012 370 aa21.32■■□□□ 1
CLN6-212ENST00000636020 CLP1Q92989 425 aaKnown RBP21.32■■□□□ 1
CLN6-212ENST00000636020 FSD1Q9BTV5 496 aa21.32■■□□□ 1
CLN6-212ENST00000636020 MAF1Q9H063 256 aa21.32■■□□□ 1
CLN6-212ENST00000636020 COL20A1Q9P218 1284 aa21.32■■□□□ 1
CLN6-212ENST00000636020 USH1GQ495M9 461 aa21.31■■□□□ 1
CLN6-212ENST00000636020 ATP6V0A1Q93050 837 aa21.31■■□□□ 1
CLN6-212ENST00000636020 MYH7BA7E2Y1 1941 aa21.3■■□□□ 1
CLN6-212ENST00000636020 FOXP2O15409 715 aa21.3■■□□□ 1
CLN6-212ENST00000636020 HOXC8P31273 242 aa21.3■■□□□ 1
CLN6-212ENST00000636020 NUBP1P53384 320 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms