RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 CCDC149Q6ZUS6 474 aa8.93□□□□□ -0.98
SMARCA2-243ENST00000635590 RSRC2Q7L4I2 434 aaKnown RBP8.93□□□□□ -0.98
SMARCA2-243ENST00000635590 MTDHQ86UE4 582 aaKnown RBP8.93□□□□□ -0.98
SMARCA2-243ENST00000635590 MICALL1Q8N3F8 863 aa8.93□□□□□ -0.98
SMARCA2-243ENST00000635590 BAHD1Q8TBE0 780 aaPredicted RBP8.93□□□□□ -0.98
SMARCA2-243ENST00000635590 CDK5RAP3Q96JB5 506 aa8.93□□□□□ -0.98
SMARCA2-243ENST00000635590 TBCBQ99426 244 aa8.93□□□□□ -0.98
SMARCA2-243ENST00000635590 NKX2-4Q9H2Z4 354 aa8.93□□□□□ -0.98
SMARCA2-243ENST00000635590 H2AFY2Q9P0M6 372 aaPredicted RBP8.93□□□□□ -0.98
SMARCA2-243ENST00000635590 J3KRW8 73 aa8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 CYP11A1P05108 521 aa8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 HOXC12P31275 282 aa8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 GRK6P43250 576 aa8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 EIF5P55010 431 aaKnown RBP8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 RING1Q06587 406 aa8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 CLUL1Q15846 466 aa8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 BROXQ5VW32 411 aa8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 OVCH2Q7RTZ1 564 aa8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 DEPTORQ8TB45 409 aa8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 DCAF4Q8WV16 495 aa8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 CCDC140Q96MF4 163 aa8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 MKRN2Q9H000 416 aaKnown RBP8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 RSPH9Q9H1X1 276 aaPredicted RBP8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 SOX17Q9H6I2 414 aaPredicted RBP8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 PTPRKQ15262 1439 aa8.92□□□□□ -0.98
SMARCA2-243ENST00000635590 CTSBP07858 339 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 TBC1D8BQ0IIM8 1120 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 ACAP2Q15057 778 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 POU4F3Q15319 338 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 ATAT1Q5SQI0 421 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 DENND5AQ6IQ26 1287 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 PDXDC1Q6P996 788 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 SAPCD2Q86UD0 394 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 RASSF3Q86WH2 238 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 TRIM22Q8IYM9 498 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 CHST14Q8NCH0 376 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 DIS3LQ8TF46 1054 aaKnown RBP8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 ISCA1Q9BUE6 129 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 GP6Q9HCN6 339 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 NDFIP2Q9NV92 336 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 ZNF652Q9Y2D9 606 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 HIF3AQ9Y2N7 669 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 SLC45A1Q9Y2W3 748 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 hCG_1642624A0A1W2PR95 340 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 SCG5P05408 212 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 VDRP11473 427 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 HSD3B1P14060 373 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 CPB1P15086 417 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 SMPD1P17405 629 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 MAOBP27338 520 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 ECI1P42126 302 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 TERF1P54274 439 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 CABP4P57796 275 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 TCOF1Q13428 1488 aaKnown RBP8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 SEMA5AQ13591 1074 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 PCSK7Q16549 785 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 ZC3H12AQ5D1E8 599 aaKnown RBP8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 C16orf54Q6UWD8 224 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 ZC3H7AQ8IWR0 971 aaKnown RBP8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 MRPL41Q8IXM3 137 aaKnown RBP8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 HPS1Q92902 700 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 DPH2Q9BQC3 489 aaPredicted RBP8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 ANP32EQ9BTT0 268 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 APOL5Q9BWW9 433 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 POLHQ9Y253 713 aa8.91□□□□□ -0.98
SMARCA2-243ENST00000635590 LTBP4Q8N2S1 1624 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 FAM177BA6PVY3 158 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 RASA4BC9J798 803 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 ARVCFO00192 962 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 RASA4O43374 803 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 HIP1RO75146 1068 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 CKMP06732 381 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 ITGA4P13612 1032 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 NAT1P18440 290 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 GPR3P46089 330 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 RXRGP48443 463 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 MECP2P51608 486 aaKnown RBP8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 CYP4F3Q08477 520 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 CNGB1Q14028 1251 aaPredicted RBP8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 PDE3AQ14432 1141 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 KIF4BQ2VIQ3 1234 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 TMEM177Q53S58 311 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 TXNDC11Q6PKC3 985 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 C1orf122Q6ZSJ8 110 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 C7orf61Q8IZ16 206 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 HPS3Q969F9 1004 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 GCC1Q96CN9 775 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 SERINC2Q96SA4 455 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 GTPBP4Q9BZE4 634 aaKnown RBP8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 UBE2OQ9C0C9 1292 aaKnown RBP8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 NOL7Q9UMY1 257 aaKnown RBP8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 SLC4A7Q9Y6M7 1214 aa8.9□□□□□ -0.98
SMARCA2-243ENST00000635590 IL6STP40189 918 aaPredicted RBP8.89□□□□□ -0.99
SMARCA2-243ENST00000635590 KIAA0753Q2KHM9 967 aa8.89□□□□□ -0.99
SMARCA2-243ENST00000635590 CREB3L3Q68CJ9 461 aa8.89□□□□□ -0.99
SMARCA2-243ENST00000635590 SLC6A19Q695T7 634 aa8.89□□□□□ -0.99
SMARCA2-243ENST00000635590 LILRA6Q6PI73 481 aa8.89□□□□□ -0.99
SMARCA2-243ENST00000635590 RINLQ6ZS11 566 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms