RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 ITGB5P18084 799 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 PTGS1P23219 599 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 IRX5P78411 483 aaPredicted RBP16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 HMGN5P82970 282 aaKnown RBP16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 ARHGAP1Q07960 439 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 NPY5RQ15761 445 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 C1orf53Q5VUE5 145 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 BLIDQ8IZY5 108 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 CRYGNQ8WXF5 182 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 COPS5Q92905 334 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 ZFP91Q96JP5 570 aaPredicted RBP16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 PGBD1Q96JS3 809 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 GLT1D1Q96MS3 346 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 ADAMTS3O15072 1205 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 KPNA6O60684 536 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 ELP1O95163 1332 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 CYP3A4P08684 503 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 UBA1P22314 1058 aaKnown RBP16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 BEX3Q00994 111 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 SEMA3FQ13275 785 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 MTMR1Q13613 665 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 LAMC2Q13753 1193 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 SNX17Q15036 470 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 CELF3Q5SZQ8 465 aaKnown RBP16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 NIPA1Q7RTP0 329 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 DHX37Q8IY37 1157 aaKnown RBP16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 GIMAP8Q8ND71 665 aaPredicted RBP16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 PPTC7Q8NI37 304 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 TMX3Q96JJ7 454 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 ALPK3Q96L96 1907 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 SENP7Q9BQF6 1050 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 JADE2Q9NQC1 790 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 POLR3EQ9NVU0 708 aa16.83■□□□□ 0.28
CDC42BPB-209ENST00000634889 MYH7BA7E2Y1 1941 aa16.82■□□□□ 0.28
CDC42BPB-209ENST00000634889 GGPS1O95749 300 aa16.82■□□□□ 0.28
CDC42BPB-209ENST00000634889 SP2Q02086 613 aa16.82■□□□□ 0.28
CDC42BPB-209ENST00000634889 TRIM29Q14134 588 aa16.82■□□□□ 0.28
CDC42BPB-209ENST00000634889 NEDD9Q14511 834 aa16.82■□□□□ 0.28
CDC42BPB-209ENST00000634889 CEP55Q53EZ4 464 aa16.82■□□□□ 0.28
CDC42BPB-209ENST00000634889 MYSM1Q5VVJ2 828 aa16.82■□□□□ 0.28
CDC42BPB-209ENST00000634889 SLC39A5Q6ZMH5 540 aa16.82■□□□□ 0.28
CDC42BPB-209ENST00000634889 RASGRP4Q8TDF6 673 aa16.82■□□□□ 0.28
CDC42BPB-209ENST00000634889 FERMT2Q96AC1 680 aa16.82■□□□□ 0.28
CDC42BPB-209ENST00000634889 MXRA8Q9BRK3 442 aa16.82■□□□□ 0.28
CDC42BPB-209ENST00000634889 STARD7Q9NQZ5 370 aa16.82■□□□□ 0.28
CDC42BPB-209ENST00000634889 KCNJ14Q9UNX9 436 aa16.82■□□□□ 0.28
CDC42BPB-209ENST00000634889 EVI5O60447 810 aa16.81■□□□□ 0.28
CDC42BPB-209ENST00000634889 DTNBO60941 627 aa16.81■□□□□ 0.28
CDC42BPB-209ENST00000634889 MMP3P08254 477 aa16.81■□□□□ 0.28
CDC42BPB-209ENST00000634889 LRRC26Q2I0M4 334 aa16.81■□□□□ 0.28
CDC42BPB-209ENST00000634889 METTL7BQ6UX53 244 aa16.81■□□□□ 0.28
CDC42BPB-209ENST00000634889 KRT25Q7Z3Z0 450 aa16.81■□□□□ 0.28
CDC42BPB-209ENST00000634889 AFG1LQ8WV93 481 aa16.81■□□□□ 0.28
CDC42BPB-209ENST00000634889 DPF3Q92784 378 aa16.81■□□□□ 0.28
CDC42BPB-209ENST00000634889 SEZ6LQ9BYH1 1024 aa16.81■□□□□ 0.28
CDC42BPB-209ENST00000634889 MLXIPQ9HAP2 919 aa16.81■□□□□ 0.28
CDC42BPB-209ENST00000634889 BRMS1Q9HCU9 246 aa16.81■□□□□ 0.28
CDC42BPB-209ENST00000634889 MEIS1O00470 390 aa16.8■□□□□ 0.28
CDC42BPB-209ENST00000634889 HOXD8P13378 290 aaPredicted RBP16.8■□□□□ 0.28
CDC42BPB-209ENST00000634889 CIITAP33076 1130 aa16.8■□□□□ 0.28
CDC42BPB-209ENST00000634889 ZNF76P36508 570 aa16.8■□□□□ 0.28
CDC42BPB-209ENST00000634889 USP11P51784 963 aa16.8■□□□□ 0.28
CDC42BPB-209ENST00000634889 PURAQ00577 322 aaKnown RBP16.8■□□□□ 0.28
CDC42BPB-209ENST00000634889 SETQ01105 290 aaPredicted RBP16.8■□□□□ 0.28
CDC42BPB-209ENST00000634889 DGKDQ16760 1214 aa16.8■□□□□ 0.28
CDC42BPB-209ENST00000634889 CXCL17Q6UXB2 119 aa16.8■□□□□ 0.28
CDC42BPB-209ENST00000634889 SPATA33Q96N06 139 aa16.8■□□□□ 0.28
CDC42BPB-209ENST00000634889 KCNH7Q9NS40 1196 aa16.8■□□□□ 0.28
CDC42BPB-209ENST00000634889 GJB4Q9NTQ9 266 aa16.8■□□□□ 0.28
CDC42BPB-209ENST00000634889 MROH7Q68CQ1 1323 aa16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 IGLV3-22A0A075B6J6 115 aa16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 A0A0U1RQG5 324 aaPredicted RBP16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 FAM86B1E9PN63 330 aa16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 MMP1P03956 469 aa16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 FAM86B2P0C5J1 330 aa16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 KCNA2P16389 499 aa16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 KRT2P35908 639 aa16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 ATN1P54259 1190 aaPredicted RBP16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 NONOQ15233 471 aaKnown RBP eCLIP16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 FAM184AQ8NB25 1140 aa16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 TBCKQ8TEA7 893 aa16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 MTG1Q9BT17 334 aaPredicted RBP16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 KIF3AQ9Y496 699 aa16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 NR2E3Q9Y5X4 410 aa16.79■□□□□ 0.28
CDC42BPB-209ENST00000634889 CCDC194A0A1B0GVG4 234 aa16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 NOP56O00567 594 aaKnown RBP16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 PPFIA4O75335 1185 aa16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 MYL3P08590 195 aa16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 RTP1P59025 263 aa16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 HSDL1Q3SXM5 330 aa16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 KRT40Q6A162 431 aa16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 MOXD1Q6UVY6 613 aa16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 CYFIP1Q7L576 1253 aa16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 ANKRD33Q7Z3H0 272 aa16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 CYP2W1Q8TAV3 490 aa16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 VTI1AQ96AJ9 217 aa16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 C8orf76Q96K31 380 aa16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 DOCK5Q9H7D0 1870 aa16.78■□□□□ 0.28
CDC42BPB-209ENST00000634889 NFASCO94856 1347 aa16.77■□□□□ 0.28
CDC42BPB-209ENST00000634889 SCN10AQ9Y5Y9 1956 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms