RNA–Protein interactions for RNA: ENST00000633295.1

LINC01002-225, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 3

Gene LINC01002, Length 492 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-225	ENST00000633295	GPR3	P46089	330 aa		10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	TRAPPC10	P48553	1259 aa		10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	TRAPPC3L	Q5T215	181 aa		10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	CISD2	Q8N5K1	135 aa	Known RBP	10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	GPR161	Q8N6U8	529 aa	Known RBP	10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	ZNF610	Q8N9Z0	462 aa		10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	GALNT6	Q8NCL4	622 aa		10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	RCBTB1	Q8NDN9	531 aa		10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	FCRL3	Q96P31	734 aa	Predicted RBP	10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	FAM193B	Q96PV7	902 aa	Predicted RBP	10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	RNF38	Q9H0F5	515 aa		10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	CSRNP2	Q9H175	543 aa		10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	CLEC1B	Q9P126	229 aa		10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	ZNF69	Q9UC07	566 aa		10.12	□□□□□ -0.79
LINC01002-225	ENST00000633295	ZBED1	O96006	694 aa		10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	IFNGR1	P15260	489 aa		10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	KIR3DL1	P43629	444 aa		10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	SCAND1	P57086	179 aa		10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	CRY1	Q16526	586 aa		10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	ZNF655	Q8N720	491 aa	Predicted RBP	10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	PAF1	Q8N7H5	531 aa		10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	ANKRD42	Q8N9B4	389 aa		10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	DAGLB	Q8NCG7	672 aa		10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	ORAI2	Q96SN7	254 aa		10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	YIPF2	Q9BWQ6	316 aa		10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	HDAC8	Q9BY41	377 aa		10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	TPX2	Q9ULW0	747 aa	Known RBP	10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	DNM3	Q9UQ16	869 aa		10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	LZTS1	Q9Y250	596 aa		10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295	NOC2L	Q9Y3T9	749 aa	Known RBP	10.11	□□□□□ -0.79
LINC01002-225	ENST00000633295		A0A0A0MRY4	1105 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	GOLGA8A	A7E2F4	631 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	GOLGA8B	A8MQT2	603 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	MEIS1	O00470	390 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	OIP5	O43482	229 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	AP1G1	O43747	822 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	H2AFY	O75367	372 aa	Known RBP	10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	TPP2	P29144	1249 aa	Predicted RBP	10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	SMAD3	P84022	425 aa	Known RBP	10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	ZNF174	Q15697	407 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	SMAD2	Q15796	467 aa	Known RBP	10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	PCGF5	Q86SE9	256 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	FAM186B	Q8IYM0	893 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	CPXCR1	Q8N123	301 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	MYD88	Q99836	296 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	ZDHHC5	Q9C0B5	715 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	FAM204A	Q9H8W3	233 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	CCM2L	Q9NUG4	571 aa	Predicted RBP	10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	CBLC	Q9ULV8	474 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	MINPP1	Q9UNW1	487 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	DAGLA	Q9Y4D2	1042 aa		10.1	□□□□□ -0.79
LINC01002-225	ENST00000633295	SLC12A8	A0AV02	714 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	MYO1B	O43795	1136 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	EOMES	O95936	686 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	MYL3	P08590	195 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	TYRP1	P17643	537 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	RAB6A	P20340	208 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	ATAT1	Q5SQI0	421 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	IGF2-AS	Q6U949	168 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	NPAS3	Q8IXF0	933 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295		Q96M66	194 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	ACAP3	Q96P50	834 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	SELENOO	Q9BVL4	669 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	SLC12A9	Q9BXP2	914 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	SEMA6C	Q9H3T2	930 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	GTF2IRD1	Q9UHL9	959 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	PPP2R3B	Q9Y5P8	575 aa		10.09	□□□□□ -0.79
LINC01002-225	ENST00000633295	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	SETSIP	P0DME0	302 aa		10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	VSIG8	P0DPA2	414 aa		10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	PAM	P19021	973 aa		10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	ADK	P55263	362 aa	Known RBP	10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	CHAF1A	Q13111	956 aa	Predicted RBP	10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	STK3	Q13188	491 aa		10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	ACAP2	Q15057	778 aa		10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	CLUL1	Q15846	466 aa		10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	C1orf228	Q6PIY5	440 aa		10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	NGRN	Q9NPE2	291 aa	Known RBP	10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	CATSPERZ	Q9NTU4	200 aa		10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	LUZP4	Q9P127	313 aa		10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	DMTF1	Q9Y222	760 aa		10.08	□□□□□ -0.8
LINC01002-225	ENST00000633295	ZNF561-AS1	K7EIQ3	104 aa		10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	TPP1	O14773	563 aa		10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	ZBTB48	P10074	688 aa	Predicted RBP	10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	COL6A1	P12109	1028 aa		10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	HAL	P42357	657 aa		10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	ALDH5A1	P51649	535 aa	Predicted RBP	10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	MAPRE1	Q15691	268 aa	Known RBP	10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	RNFT1	Q5M7Z0	435 aa		10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	HHIPL2	Q6UWX4	724 aa		10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	TTLL7	Q6ZT98	887 aa		10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	C22orf34	Q6ZV56	151 aa		10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	SRL	Q86TD4	932 aa		10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	TMEM130	Q8N3G9	435 aa		10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	KIAA1958	Q8N8K9	716 aa		10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	VPS37A	Q8NEZ2	397 aa		10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	EZH1	Q92800	747 aa	Predicted RBP	10.07	□□□□□ -0.8
LINC01002-225	ENST00000633295	SWAP70	Q9UH65	585 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms