RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 SEMA6BQ9H3T3 888 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 MAGEC2Q9UBF1 373 aaPredicted RBP6.21□□□□□ -1.42
NEK3-211ENST00000629912 KIAA1024Q9UPX6 916 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 DNM3Q9UQ16 869 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 MAPK8IP1Q9UQF2 711 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 BCS1LQ9Y276 419 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 FRMD3A2A2Y4 597 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 TRIM49BA6NDI0 452 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 LGALS16A8MUM7 142 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 MEIS1O00470 390 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 MED24O75448 989 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 PSMD10O75832 226 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 KIF20AO95235 890 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 EGFRP00533 1210 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 TPM1P09493 284 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 BCRP11274 1271 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 FCER1AP12319 257 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 CYP11B2P19099 503 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 HOXA13P31271 388 aaPredicted RBP6.2□□□□□ -1.42
NEK3-211ENST00000629912 ZNF76P36508 570 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 USP14P54578 494 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 ADKP55263 362 aaKnown RBP6.2□□□□□ -1.42
NEK3-211ENST00000629912 PPP2R5CQ13362 524 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 R3HDM1Q15032 1099 aaKnown RBP6.2□□□□□ -1.42
NEK3-211ENST00000629912 KIF4BQ2VIQ3 1234 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 ARSHQ5FYA8 562 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 FIGNQ5HY92 759 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 HAUS3Q68CZ6 603 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 CCDC174Q6PII3 467 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 B3GNT9Q6UX72 402 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 OTOP1Q7RTM1 612 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 DYMQ7RTS9 669 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 SAMD7Q7Z3H4 446 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 MCF2L2Q86YR7 1114 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 TMTC1Q8IUR5 882 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 APOBEC3FQ8IUX4 373 aaKnown RBP6.2□□□□□ -1.42
NEK3-211ENST00000629912 CNGA4Q8IV77 575 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 CCDC65Q8IXS2 484 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 MYOCDQ8IZQ8 938 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 CSGALNACT2Q8N6G5 542 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 RETREG2Q8NC44 543 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 KIFC2Q96AC6 838 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 IQCDQ96DY2 449 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 PPP1R13BQ96KQ4 1090 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 TRIM47Q96LD4 638 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 HSD17B14Q9BPX1 270 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 SLF1Q9BQI6 1058 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 GLIS2Q9BZE0 524 aaPredicted RBP6.2□□□□□ -1.42
NEK3-211ENST00000629912 SLC38A10Q9HBR0 1119 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 TUFT1Q9NNX1 390 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 EMILIN3Q9NT22 766 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 PANK4Q9NVE7 773 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 TRMT1Q9NXH9 659 aaKnown RBP6.2□□□□□ -1.42
NEK3-211ENST00000629912 HACL1Q9UJ83 578 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 VAV3Q9UKW4 847 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 PCDHA2Q9Y5H9 948 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 ZNF536O15090 1300 aa6.2□□□□□ -1.42
NEK3-211ENST00000629912 POLR2AP24928 1970 aaKnown RBP6.19□□□□□ -1.42
NEK3-211ENST00000629912 UQCRHLA0A096LP55 91 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 C19orf81C9J6K1 198 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 E9PMD0 336 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 RIOK3O14730 519 aaKnown RBP6.19□□□□□ -1.42
NEK3-211ENST00000629912 CTIFO43310 598 aaKnown RBP6.19□□□□□ -1.42
NEK3-211ENST00000629912 MFAP3LO75121 409 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 COBLO75128 1261 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 ZBED4O75132 1171 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 SLITRK3O94933 977 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 EYA4O95677 639 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 CFBP00751 764 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 GYPCP04921 128 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 UQCRHP07919 91 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 CASP14P31944 242 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 STAT3P40763 770 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 ETF1P62495 437 aaKnown RBP6.19□□□□□ -1.42
NEK3-211ENST00000629912 UBXN1Q04323 297 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 GIT2Q14161 759 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 EPHA7Q15375 998 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 SYCP1Q15431 976 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 TBC1D10BQ4KMP7 808 aaPredicted RBP6.19□□□□□ -1.42
NEK3-211ENST00000629912 CEP55Q53EZ4 464 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 NBPF12Q5TAG4 269 aaPredicted RBP6.19□□□□□ -1.42
NEK3-211ENST00000629912 TRIM65Q6PJ69 517 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 PPP4R3CPQ6ZMV5 832 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 KRT26Q7Z3Y9 468 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 ZC3H3Q8IXZ2 948 aaKnown RBP6.19□□□□□ -1.42
NEK3-211ENST00000629912 SCYL3Q8IZE3 742 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 OR8K1Q8NGG5 319 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 KIF18AQ8NI77 898 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 CYP2W1Q8TAV3 490 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 CLEC4DQ8WXI8 215 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 GJA10Q969M2 543 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 C12orf42Q96LP6 360 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 C16orf45Q96MC5 204 aaPredicted RBP6.19□□□□□ -1.42
NEK3-211ENST00000629912 CEP63Q96MT8 703 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 ERGIC2Q96RQ1 377 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 RIT2Q99578 217 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 TSG101Q99816 390 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 EIF2AK1Q9BQI3 630 aaKnown RBP6.19□□□□□ -1.42
NEK3-211ENST00000629912 MXRA8Q9BRK3 442 aa6.19□□□□□ -1.42
NEK3-211ENST00000629912 TUBGCP2Q9BSJ2 902 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms