RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 NFATC3Q12968 1075 aa5.08□□□□□ -1.6
VPS8-228ENST00000628962 ZNF326Q5BKZ1 582 aaKnown RBP5.08□□□□□ -1.6
VPS8-228ENST00000628962 CCDC81Q6ZN84 652 aa5.08□□□□□ -1.6
VPS8-228ENST00000628962 NLRP10Q86W26 655 aa5.08□□□□□ -1.6
VPS8-228ENST00000628962 TOE1Q96GM8 510 aaKnown RBP5.08□□□□□ -1.6
VPS8-228ENST00000628962 WRNIP1Q96S55 665 aa5.08□□□□□ -1.6
VPS8-228ENST00000628962 ZNF341Q9BYN7 854 aa5.08□□□□□ -1.6
VPS8-228ENST00000628962 APEX2Q9UBZ4 518 aa5.08□□□□□ -1.6
VPS8-228ENST00000628962 FTSJ1Q9UET6 329 aa5.08□□□□□ -1.6
VPS8-228ENST00000628962 WASF3Q9UPY6 502 aa5.08□□□□□ -1.6
VPS8-228ENST00000628962 AKT3Q9Y243 479 aa5.08□□□□□ -1.6
VPS8-228ENST00000628962 EMC9Q9Y3B6 208 aa5.08□□□□□ -1.6
VPS8-228ENST00000628962 KCNH1O95259 989 aa5.07□□□□□ -1.6
VPS8-228ENST00000628962 COL6A1P12109 1028 aa5.07□□□□□ -1.6
VPS8-228ENST00000628962 CYP4F3Q08477 520 aa5.07□□□□□ -1.6
VPS8-228ENST00000628962 IGFL4Q6B9Z1 124 aa5.07□□□□□ -1.6
VPS8-228ENST00000628962 TEPPQ6URK8 271 aa5.07□□□□□ -1.6
VPS8-228ENST00000628962 ARRDC4Q8NCT1 418 aa5.07□□□□□ -1.6
VPS8-228ENST00000628962 NPLOC4Q8TAT6 608 aa5.07□□□□□ -1.6
VPS8-228ENST00000628962 FRS2Q8WU20 508 aa5.07□□□□□ -1.6
VPS8-228ENST00000628962 ZNF503Q96F45 646 aa5.07□□□□□ -1.6
VPS8-228ENST00000628962 BCL2L13Q9BXK5 485 aa5.07□□□□□ -1.6
VPS8-228ENST00000628962 BARX1Q9HBU1 254 aaPredicted RBP5.07□□□□□ -1.6
VPS8-228ENST00000628962 ADAM29Q9UKF5 820 aa5.07□□□□□ -1.6
VPS8-228ENST00000628962 CROTQ9UKG9 612 aa5.07□□□□□ -1.6
VPS8-228ENST00000628962 ZDHHC9Q9Y397 364 aa5.07□□□□□ -1.6
VPS8-228ENST00000628962 TCRBV5S2A0A599 114 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 ANKRD34BA5PLL1 514 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 CNOT4O95628 575 aaKnown RBP5.06□□□□□ -1.6
VPS8-228ENST00000628962 LRG1P02750 347 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 INHBEP58166 350 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 RPL11P62913 178 aaKnown RBP5.06□□□□□ -1.6
VPS8-228ENST00000628962 PRKD1Q15139 912 aaPredicted RBP5.06□□□□□ -1.6
VPS8-228ENST00000628962 ZNF394Q53GI3 561 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 CEP68Q76N32 757 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 ZNF575Q86XF7 245 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 TMEM87AQ8NBN3 555 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 GIPC2Q8TF65 315 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 CHFRQ96EP1 664 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 TMEM209Q96SK2 561 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 CRBNQ96SW2 442 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 SEC61A2Q9H9S3 476 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 CYP26B1Q9NR63 512 aa5.06□□□□□ -1.6
VPS8-228ENST00000628962 TIMM13Q9Y5L4 95 aaPredicted RBP5.06□□□□□ -1.6
VPS8-228ENST00000628962 WDR33Q9C0J8 1336 aaKnown RBP5.05□□□□□ -1.6
VPS8-228ENST00000628962 ARNTLO00327 626 aa5.05□□□□□ -1.6
VPS8-228ENST00000628962 FOXS1O43638 330 aa5.05□□□□□ -1.6
VPS8-228ENST00000628962 IGSF3O75054 1194 aa5.05□□□□□ -1.6
VPS8-228ENST00000628962 TADA3O75528 432 aa5.05□□□□□ -1.6
VPS8-228ENST00000628962 GIPRP48546 466 aa5.05□□□□□ -1.6
VPS8-228ENST00000628962 GTF2A2P52657 109 aa5.05□□□□□ -1.6
VPS8-228ENST00000628962 COL9A2Q14055 689 aaPredicted RBP5.05□□□□□ -1.6
VPS8-228ENST00000628962 HS1BP3Q53T59 392 aa5.05□□□□□ -1.6
VPS8-228ENST00000628962 IQCEQ6IPM2 695 aa5.05□□□□□ -1.6
VPS8-228ENST00000628962 TCTN3Q6NUS6 607 aa5.05□□□□□ -1.6
VPS8-228ENST00000628962 TRMT10BQ6PF06 316 aaKnown RBP5.05□□□□□ -1.6
VPS8-228ENST00000628962 RNF207Q6ZRF8 634 aa5.05□□□□□ -1.6
VPS8-228ENST00000628962 AMER2Q8N7J2 671 aa5.05□□□□□ -1.6
VPS8-228ENST00000628962 BVESQ8NE79 360 aa5.05□□□□□ -1.6
VPS8-228ENST00000628962 TRMT2BQ96GJ1 504 aaKnown RBP5.05□□□□□ -1.6
VPS8-228ENST00000628962 PCDHGB7Q9Y5F8 929 aa5.05□□□□□ -1.6
VPS8-228ENST00000628962 HGSO14964 777 aaPredicted RBP5.04□□□□□ -1.6
VPS8-228ENST00000628962 KLHL18O94889 574 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 ZNF76P36508 570 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 BCL6P41182 706 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 EIF6P56537 245 aaKnown RBP5.04□□□□□ -1.6
VPS8-228ENST00000628962 CHRNA2Q15822 529 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 EMC4Q5J8M3 183 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 GTF2IRD2BQ6EKJ0 949 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 POMZP3Q6PJE2 187 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 GTF2IRD2Q86UP8 949 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 CCDC103Q8IW40 242 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 CRACR2BQ8N4Y2 399 aaPredicted RBP5.04□□□□□ -1.6
VPS8-228ENST00000628962 GNRHR2Q96P88 292 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 NKX2-4Q9H2Z4 354 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 GINM1Q9NU53 330 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 HSPBP1Q9NZL4 362 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 PCDHB4Q9Y5E5 795 aa5.04□□□□□ -1.6
VPS8-228ENST00000628962 PCSK5Q92824 1860 aa5.03□□□□□ -1.6
VPS8-228ENST00000628962 RACK1P63244 317 aaKnown RBP5.03□□□□□ -1.6
VPS8-228ENST00000628962 FANCCQ00597 558 aa5.03□□□□□ -1.6
VPS8-228ENST00000628962 ABHD18Q0P651 414 aa5.03□□□□□ -1.6
VPS8-228ENST00000628962 E4F1Q66K89 784 aaPredicted RBP5.03□□□□□ -1.6
VPS8-228ENST00000628962 KIAA1211LQ6NV74 962 aa5.03□□□□□ -1.6
VPS8-228ENST00000628962 TRIM59Q8IWR1 403 aa5.03□□□□□ -1.6
VPS8-228ENST00000628962 NUDT10Q8NFP7 164 aa5.03□□□□□ -1.6
VPS8-228ENST00000628962 OR6P1Q8NGX9 317 aa5.03□□□□□ -1.6
VPS8-228ENST00000628962 NUDT11Q96G61 164 aa5.03□□□□□ -1.6
VPS8-228ENST00000628962 TMEM169Q96HH4 297 aa5.03□□□□□ -1.6
VPS8-228ENST00000628962 CEP89Q96ST8 783 aa5.03□□□□□ -1.6
VPS8-228ENST00000628962 METTL5Q9NRN9 209 aaKnown RBP5.03□□□□□ -1.6
VPS8-228ENST00000628962 TMEFF2Q9UIK5 374 aaPredicted RBP5.03□□□□□ -1.6
VPS8-228ENST00000628962 FBXL7Q9UJT9 491 aa5.03□□□□□ -1.6
VPS8-228ENST00000628962 SLC4A7Q9Y6M7 1214 aa5.03□□□□□ -1.6
VPS8-228ENST00000628962 NARSO43776 548 aaKnown RBP5.02□□□□□ -1.61
VPS8-228ENST00000628962 ZNF202O95125 648 aa5.02□□□□□ -1.61
VPS8-228ENST00000628962 SOX9P48436 509 aa5.02□□□□□ -1.61
VPS8-228ENST00000628962 DPTQ07507 201 aa5.02□□□□□ -1.61
VPS8-228ENST00000628962 STEAP3Q658P3 488 aa5.02□□□□□ -1.61
VPS8-228ENST00000628962 TMC5Q6UXY8 1006 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms