RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 VPS72Q15906 364 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 ZNF362Q5T0B9 420 aaPredicted RBP10.08□□□□□ -0.8
USB1-216ENST00000624720 IRGCQ6NXR0 463 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 UNC5DQ6UXZ4 953 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 LUZP1Q86V48 1076 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 ARL6IP6Q8N6S5 226 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 CLSTN2Q9H4D0 955 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 KRT82Q9NSB4 513 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 SUCLA2Q9P2R7 463 aaPredicted RBP10.08□□□□□ -0.8
USB1-216ENST00000624720 A0A0D9SFI3 127 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 CCDC151A5D8V7 595 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 LUC7L3O95232 432 aaKnown RBP10.08□□□□□ -0.8
USB1-216ENST00000624720 ATP5JP18859 108 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 CCT6AP40227 531 aaKnown RBP10.08□□□□□ -0.8
USB1-216ENST00000624720 PEX5P50542 639 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 EVCP57679 992 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 IFFO1Q0D2I5 559 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 MTX1Q13505 466 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 NT5DC4Q86YG4 428 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 SIX5Q8N196 739 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 CCDC110Q8TBZ0 833 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 PIDD1Q9HB75 910 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 CIDEBQ9UHD4 219 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 HDAC9Q9UKV0 1011 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 C15orf41Q9Y2V0 281 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 DAAM1Q9Y4D1 1078 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 NRAPQ86VF7 1730 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 TNS2Q63HR2 1409 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 hCG_2014768A0A024R1R8 64 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 KCNJ13O60928 360 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 PHACTR2O75167 634 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 FBXO21O94952 628 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 UBL4AP11441 157 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 TBX4P57082 545 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 TOMM20Q15388 145 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 POTEAQ6S8J7 498 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 ATG9AQ7Z3C6 839 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 LARGE2Q8N3Y3 721 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 APPL2Q8NEU8 664 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 RASSF8Q8NHQ8 419 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 IL17RAQ96F46 866 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 ISCA1Q9BUE6 129 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 GBP3Q9H0R5 595 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 INIPQ9NRY2 104 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 FKBP14Q9NWM8 211 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 NOSIPQ9Y314 301 aaKnown RBP10.08□□□□□ -0.8
USB1-216ENST00000624720 TAF6LQ9Y6J9 622 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 SNX2O60749 519 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 DIAPH2O60879 1101 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 ZNF254O75437 659 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 POLE2P56282 527 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 PKP1Q13835 747 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 SCARF1Q14162 830 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 BBS9Q3SYG4 887 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 ZNF589Q86UQ0 364 aaPredicted RBP10.07□□□□□ -0.8
USB1-216ENST00000624720 RASEFQ8IZ41 740 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 ZGPATQ8N5A5 531 aaKnown RBP10.07□□□□□ -0.8
USB1-216ENST00000624720 HELQQ8TDG4 1101 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 BCAS4Q8TDM0 211 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 PARVGQ9HBI0 331 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 EPB41L4AQ9HCS5 686 aaPredicted RBP10.07□□□□□ -0.8
USB1-216ENST00000624720 TYW1Q9NV66 732 aaKnown RBP10.07□□□□□ -0.8
USB1-216ENST00000624720 NDFIP2Q9NV92 336 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 KCTD5Q9NXV2 234 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 ZNF148Q9UQR1 794 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 ACTN4O43707 911 aaKnown RBP10.07□□□□□ -0.8
USB1-216ENST00000624720 TSPAN1O60635 241 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 CLASP2O75122 1294 aaKnown RBP10.07□□□□□ -0.8
USB1-216ENST00000624720 SSBP05455 408 aaKnown RBP eCLIP10.07□□□□□ -0.8
USB1-216ENST00000624720 PRLRP16471 622 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 BTF3P20290 206 aaKnown RBP10.07□□□□□ -0.8
USB1-216ENST00000624720 MSLNQ13421 630 aaPredicted RBP10.07□□□□□ -0.8
USB1-216ENST00000624720 CCDC153Q494R4 210 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 NEPROQ6NW34 567 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 ERICH1Q86X53 443 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 CCAR1Q8IX12 1150 aaKnown RBP10.07□□□□□ -0.8
USB1-216ENST00000624720 CCDC13Q8IYE1 715 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 ZBTB38Q8NAP3 1195 aaPredicted RBP10.07□□□□□ -0.8
USB1-216ENST00000624720 SLC16A10Q8TF71 515 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 UQCC2Q9BRT2 126 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 GLT8D2Q9H1C3 349 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 OSBPL3Q9H4L5 887 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 PXDNLA1KZ92 1463 aa10.07□□□□□ -0.8
USB1-216ENST00000624720 UTYO14607 1347 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 EYA2O00167 538 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 ABLIM1O14639 778 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 NPTXRO95502 500 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 TSPAN7P41732 249 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 POLD2P49005 469 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 MRPL28Q13084 256 aaKnown RBP10.06□□□□□ -0.8
USB1-216ENST00000624720 SNW1Q13573 536 aaKnown RBP10.06□□□□□ -0.8
USB1-216ENST00000624720 CCDC183Q5T5S1 534 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 MAATS1Q7Z4T9 603 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 SRGAP1Q7Z6B7 1085 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 TTLL11Q8NHH1 800 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 MRRFQ96E11 262 aaKnown RBP10.06□□□□□ -0.8
USB1-216ENST00000624720 TCF12Q99081 682 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 NUP58Q9BVL2 599 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 STAP2Q9UGK3 403 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 LNPEPQ9UIQ6 1025 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms