RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 MB21D1Q8N884 522 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 ATP2A3Q93084 1043 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 RNF34Q969K3 372 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 IRX2Q9BZI1 471 aaPredicted RBP6.13□□□□□ -1.43
ERCC6-213ENST00000624341 NDST4Q9H3R1 872 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 PCDHA4Q9UN74 947 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 BZW2Q9Y6E2 419 aaKnown RBP6.13□□□□□ -1.43
ERCC6-213ENST00000624341 USH1CQ9Y6N9 552 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 AATKQ6ZMQ8 1374 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 IGSF1Q8N6C5 1336 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 CLIC2O15247 247 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 LUC7L3O95232 432 aaKnown RBP6.13□□□□□ -1.43
ERCC6-213ENST00000624341 PHBP35232 272 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 GTF2IP78347 998 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 RESP18Q5W5W9 173 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 EMBQ6PCB8 327 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 MIER3Q7Z3K6 550 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 WDR24Q96S15 920 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 CUEDC2Q9H467 287 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 RNF14Q9UBS8 474 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 CIAO1O76071 339 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 GFPT2O94808 682 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 PDE6CP51160 858 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 BFSP1Q12934 665 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 MAP7Q14244 749 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 RCN2Q14257 317 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 FAM102BQ5T8I3 360 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 DHX40Q8IX18 779 aaKnown RBP6.13□□□□□ -1.43
ERCC6-213ENST00000624341 TBCKQ8TEA7 893 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 TRIM4Q9C037 500 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 USP40Q9NVE5 1235 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 HDAC6Q9UBN7 1215 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 TRIM49BA6NDI0 452 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 ERVV-2B6SEH9 535 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 MYO1FO00160 1098 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 STK10O94804 968 aaKnown RBP6.13□□□□□ -1.43
ERCC6-213ENST00000624341 PLCG1P19174 1290 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 PTPREP23469 700 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 CUL4BQ13620 913 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 TBC1D10BQ4KMP7 808 aaPredicted RBP6.13□□□□□ -1.43
ERCC6-213ENST00000624341 ODR4Q5SWX8 454 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 SCYL2Q6P3W7 929 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 OTUD6AQ7L8S5 288 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 GDAP1Q8TB36 358 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 WHAMMQ8TF30 809 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 ELAC2Q9BQ52 826 aaKnown RBP6.13□□□□□ -1.43
ERCC6-213ENST00000624341 MAGEF1Q9HAY2 307 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 LARSQ9P2J5 1176 aaKnown RBP6.13□□□□□ -1.43
ERCC6-213ENST00000624341 ADGRG1Q9Y653 693 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 NWD2Q9ULI1 1742 aa6.13□□□□□ -1.43
ERCC6-213ENST00000624341 ESYT3A0FGR9 886 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 LMNB1P20700 586 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 MTF1Q14872 753 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 TAF11Q15544 211 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 EPHA10Q5JZY3 1008 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 ABHD10Q9NUJ1 306 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 DNAJC17Q9NVM6 304 aaKnown RBP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 PLAAQ9Y263 795 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 PCDHA1Q9Y5I3 950 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 ITSN1Q15811 1721 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 RASGRF2O14827 1237 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 AFPP02771 609 aaKnown RBP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 SERPINB6P35237 376 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 SLC8A3P57103 927 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 TRIP13Q15645 432 aaPredicted RBP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 SH2D4BQ5SQS7 431 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 NXNQ6DKJ4 435 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 NEK9Q8TD19 979 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 DPF2Q92785 391 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 FMO2Q99518 471 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 TRIM6Q9C030 488 aaPredicted RBP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 THAP9Q9H5L6 903 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 ACTR5Q9H9F9 607 aaPredicted RBP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 C1orf112Q9NSG2 853 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 CCNL1Q9UK58 526 aaPredicted RBP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 TNS3Q68CZ2 1445 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 ABCC12Q96J65 1359 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 FOXN1O15353 648 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 LIFRP42702 1097 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 YWHAGP61981 247 aaKnown RBP eCLIP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 ACTN3Q08043 901 aaPredicted RBP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 GRM1Q13255 1194 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 RBBP5Q15291 538 aaKnown RBP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 TMED2Q15363 201 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 SLFN12Q8IYM2 578 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 PPP4R1Q8TF05 950 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 THOC1Q96FV9 657 aaKnown RBP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 AK8Q96MA6 479 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 SEC31BQ9NQW1 1179 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 HMGB1P1B2RPK0 211 aaPredicted RBP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 DKC1O60832 514 aaKnown RBP eCLIP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 NSFP46459 744 aaKnown RBP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 SGO2Q562F6 1265 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 XKR9Q5GH70 373 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 E4F1Q66K89 784 aaPredicted RBP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 NUGGCQ68CJ6 796 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 ZNF449Q6P9G9 518 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 ARHGEF25Q86VW2 580 aa6.12□□□□□ -1.43
ERCC6-213ENST00000624341 PDCD7Q8N8D1 485 aaKnown RBP6.12□□□□□ -1.43
ERCC6-213ENST00000624341 IWS1Q96ST2 819 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms