RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 PURAQ00577 322 aaKnown RBP15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 SCRN1Q12765 414 aa15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 AP3B2Q13367 1082 aa15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 JAKMIP3Q5VZ66 844 aa15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 SPATA33Q96N06 139 aa15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 INPP4AQ96PE3 977 aaPredicted RBP15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 ZMYND12Q9H0C1 365 aa15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 TMEM260Q9NX78 707 aa15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 VPS54Q9P1Q0 977 aa15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 COLQQ9Y215 455 aaPredicted RBP15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 ESYT2A0FGR8 921 aa15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 PFKFB2O60825 505 aa15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 NLRP5P59047 1200 aa15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 MDM2Q00987 491 aaPredicted RBP15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 DGKDQ16760 1214 aa15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 FAM47CQ5HY64 1035 aa15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 CELF3Q5SZQ8 465 aaKnown RBP15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 ANKRD33Q7Z3H0 272 aa15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 REXO1Q8N1G1 1221 aaKnown RBP15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 BICD2Q8TD16 824 aa15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 TOX2Q96NM4 488 aa15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 PDLIM7Q9NR12 457 aa15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 TMEM39AQ9NV64 488 aa15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 PCDH10Q9P2E7 1040 aa15.98■□□□□ 0.15
PCDHGC3-208ENST00000622836 SPATA31C2B4DYI2 1134 aa15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 NOP56O00567 594 aaKnown RBP15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 ICAM3P32942 547 aa15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 ZNF76P36508 570 aa15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 MAGEA10P43363 369 aaPredicted RBP15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 SP2Q02086 613 aa15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 MTMR1Q13613 665 aa15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 NEDD9Q14511 834 aa15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 MCTP2Q6DN12 878 aa15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 PPTC7Q8NI37 304 aa15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 EMID1Q96A84 441 aaPredicted RBP15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 GPRASP2Q96D09 838 aa15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 CDHR1Q96JP9 859 aa15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 SEZ6LQ9BYH1 1024 aa15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 SH3GLB2Q9NR46 395 aa15.97■□□□□ 0.15
PCDHGC3-208ENST00000622836 RAG1P15918 1043 aa15.96■□□□□ 0.15
PCDHGC3-208ENST00000622836 CDK7P50613 346 aa15.96■□□□□ 0.15
PCDHGC3-208ENST00000622836 FAAP100Q0VG06 881 aa15.96■□□□□ 0.15
PCDHGC3-208ENST00000622836 MYSM1Q5VVJ2 828 aa15.96■□□□□ 0.15
PCDHGC3-208ENST00000622836 CYFIP1Q7L576 1253 aa15.96■□□□□ 0.15
PCDHGC3-208ENST00000622836 SH3RF1Q7Z6J0 888 aa15.96■□□□□ 0.15
PCDHGC3-208ENST00000622836 NECAB1Q8N987 351 aa15.96■□□□□ 0.15
PCDHGC3-208ENST00000622836 UBE2OQ9C0C9 1292 aaKnown RBP15.96■□□□□ 0.15
PCDHGC3-208ENST00000622836 PKD2L1Q9P0L9 805 aa15.96■□□□□ 0.15
PCDHGC3-208ENST00000622836 TRIM43BA6NCK2 446 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 XBP1P17861 261 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 ITGB5P18084 799 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 SREBF1P36956 1147 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 CLK2P49760 499 aaKnown RBP15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 SP4Q02446 784 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 SEMA3FQ13275 785 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 ME3Q16798 604 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 NBPF20Q3BBV1 942 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 HSDL1Q3SXM5 330 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 FAM126BQ8IXS8 530 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 GIMAP8Q8ND71 665 aaPredicted RBP15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 GTF3C6Q969F1 213 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 TRIM43Q96BQ3 446 aaPredicted RBP15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 JADE2Q9NQC1 790 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 UBIAD1Q9Y5Z9 338 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 MYH7BA7E2Y1 1941 aa15.95■□□□□ 0.14
PCDHGC3-208ENST00000622836 GRIN2DO15399 1336 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 LARGE1O95461 756 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 ZNF286BP0CG31 522 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 RBM25P49756 843 aaKnown RBP15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 ARHGAP4P98171 946 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 METTL7BQ6UX53 244 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 SLC43A3Q8NBI5 491 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 RASGRP4Q8TDF6 673 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 WASF1Q92558 559 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 BADQ92934 168 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 AIFM3Q96NN9 605 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 GDF15Q99988 308 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 MXRA8Q9BRK3 442 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 KATNAL1Q9BW62 490 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 ORC3Q9UBD5 711 aaPredicted RBP15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 NOD1Q9Y239 953 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 STK36Q9NRP7 1315 aa15.94■□□□□ 0.14
PCDHGC3-208ENST00000622836 KIAA0355O15063 1070 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 MAFGO15525 162 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 DTNBO60941 627 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 PPFIA4O75335 1185 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 CEP55Q53EZ4 464 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 NFRKBQ6P4R8 1299 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 PPP1R13LQ8WUF5 828 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 SENP7Q9BQF6 1050 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 ALG1Q9BT22 464 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 PPP1R12CQ9BZL4 782 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 TRPV6Q9H1D0 765 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 BCAS3Q9H6U6 928 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 PCDHA4Q9UN74 947 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 LIMCH1Q9UPQ0 1083 aa15.93■□□□□ 0.14
PCDHGC3-208ENST00000622836 TRIOBPQ9H2D6 2365 aa15.92■□□□□ 0.14
PCDHGC3-208ENST00000622836 ADAMTS3O15072 1205 aa15.92■□□□□ 0.14
PCDHGC3-208ENST00000622836 B4GALT4O60513 344 aa15.92■□□□□ 0.14
PCDHGC3-208ENST00000622836 ATP9AO75110 1047 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms