RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 RAB20Q9NX57 234 aa17.62■□□□□ 0.41
GABRB3-215ENST00000622697 FAM196BA6NMK8 535 aa17.62■□□□□ 0.41
GABRB3-215ENST00000622697 PPFIBP2Q8ND30 876 aa17.62■□□□□ 0.41
GABRB3-215ENST00000622697 PPP1R12CQ9BZL4 782 aa17.62■□□□□ 0.41
GABRB3-215ENST00000622697 SENP2Q9HC62 589 aa17.62■□□□□ 0.41
GABRB3-215ENST00000622697 RRP15Q9Y3B9 282 aaKnown RBP17.62■□□□□ 0.41
GABRB3-215ENST00000622697 NEDD9Q14511 834 aa17.62■□□□□ 0.41
GABRB3-215ENST00000622697 CDC37Q16543 378 aaPredicted RBP17.62■□□□□ 0.41
GABRB3-215ENST00000622697 RSAD2Q8WXG1 361 aa17.62■□□□□ 0.41
GABRB3-215ENST00000622697 HDAC6Q9UBN7 1215 aa17.62■□□□□ 0.41
GABRB3-215ENST00000622697 BZW2Q9Y6E2 419 aaKnown RBP17.62■□□□□ 0.41
GABRB3-215ENST00000622697 IFT88Q13099 833 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 GRAPQ13588 217 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 IQCB1Q15051 598 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 CCDC110Q8TBZ0 833 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 GRAPLQ8TC17 118 aaPredicted RBP17.61■□□□□ 0.41
GABRB3-215ENST00000622697 IRX2Q9BZI1 471 aaPredicted RBP17.61■□□□□ 0.41
GABRB3-215ENST00000622697 KANSL2Q9H9L4 492 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 FEZ2Q9UHY8 353 aaPredicted RBP17.61■□□□□ 0.41
GABRB3-215ENST00000622697 CLNS1AP54105 237 aaKnown RBP17.61■□□□□ 0.41
GABRB3-215ENST00000622697 CCDC14Q49A88 953 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 RIPOR2Q9Y4F9 1068 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 HNRNPDLO14979 420 aaKnown RBP17.61■□□□□ 0.41
GABRB3-215ENST00000622697 N4BP1O75113 896 aaKnown RBP17.61■□□□□ 0.41
GABRB3-215ENST00000622697 LMNB1P20700 586 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 MAIP1Q8WWC4 291 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 MLXIPQ9HAP2 919 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 BMP3P12645 472 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 GCFC2P16383 781 aaKnown RBP17.61■□□□□ 0.41
GABRB3-215ENST00000622697 MIGA2Q7L4E1 593 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 TTLL3Q9Y4R7 772 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 RFX7Q2KHR2 1363 aa17.61■□□□□ 0.41
GABRB3-215ENST00000622697 NDC80O14777 642 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 TXNRD1Q16881 649 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 TBC1D9BQ66K14 1250 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 PALM2Q8IXS6 379 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 BHMT2Q9H2M3 363 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 CIB2O75838 187 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 UBE2TQ9NPD8 197 aaPredicted RBP17.6■□□□□ 0.41
GABRB3-215ENST00000622697 SERPING1P05155 500 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 SLCO1A2P46721 670 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 SLC8A3P57103 927 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 IRX3P78415 501 aaPredicted RBP17.6■□□□□ 0.41
GABRB3-215ENST00000622697 TERF2Q15554 542 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 ZNF148Q9UQR1 794 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 PNMA6FA0A0J9YX94 578 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 BBOX1O75936 387 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 WDR19Q8NEZ3 1342 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 PIGOQ8TEQ8 1089 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 WDR24Q96S15 920 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 HOMER3Q9NSC5 361 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 NFU1Q9UMS0 254 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 USP17L15C9J2P7 530 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 USP17L13C9JLJ4 530 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 USP17L11C9JVI0 530 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 USP17L18D6R9N7 530 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 USP17L22D6RA61 530 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 USP17L17D6RBQ6 530 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 USP17L19D6RCP7 530 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 USP17L20D6RJB6 530 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 PGRMC1O00264 195 aaKnown RBP17.6■□□□□ 0.41
GABRB3-215ENST00000622697 USP17L24Q0WX57 530 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 MAP7D1Q3KQU3 841 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 GNPTABQ3T906 1256 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 USP17L6PQ6QN14 398 aa17.6■□□□□ 0.41
GABRB3-215ENST00000622697 CDHR2Q9BYE9 1310 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 LGALS16A8MUM7 142 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 TMOD1P28289 359 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 NSFP46459 744 aaKnown RBP17.59■□□□□ 0.41
GABRB3-215ENST00000622697 POLGP54098 1239 aaPredicted RBP17.59■□□□□ 0.41
GABRB3-215ENST00000622697 NNTQ13423 1086 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 CC2D1AQ6P1N0 951 aaPredicted RBP17.59■□□□□ 0.41
GABRB3-215ENST00000622697 STAG2Q8N3U4 1231 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 ZNF653Q96CK0 615 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 ATF2P15336 505 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 DAAM1Q9Y4D1 1078 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 KRT26Q7Z3Y9 468 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 TRPC6Q9Y210 931 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 DDIT3P35638 169 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 PIK3CAP42336 1068 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 DHX9Q08211 1270 aaKnown RBP17.59■□□□□ 0.41
GABRB3-215ENST00000622697 SEPT9Q9UHD8 586 aaPredicted RBP17.59■□□□□ 0.41
GABRB3-215ENST00000622697 SSX2IPQ9Y2D8 614 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 CTDNEP1O95476 244 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 HNRNPH2P55795 449 aaKnown RBP17.59■□□□□ 0.41
GABRB3-215ENST00000622697 GFPT1Q06210 699 aaPredicted RBP17.59■□□□□ 0.41
GABRB3-215ENST00000622697 FMR1Q06787 632 aaKnown RBP eCLIP17.59■□□□□ 0.41
GABRB3-215ENST00000622697 SYDE2Q5VT97 1194 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 ANO3Q9BYT9 981 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 ADGRG1Q9Y653 693 aa17.59■□□□□ 0.41
GABRB3-215ENST00000622697 TTC26A0AVF1 554 aa17.58■□□□□ 0.41
GABRB3-215ENST00000622697 E9PMD0 336 aa17.58■□□□□ 0.41
GABRB3-215ENST00000622697 SGMS1Q86VZ5 419 aa17.58■□□□□ 0.41
GABRB3-215ENST00000622697 MCF2L2Q86YR7 1114 aa17.58■□□□□ 0.41
GABRB3-215ENST00000622697 CEP95Q96GE4 821 aa17.58■□□□□ 0.41
GABRB3-215ENST00000622697 MMS19Q96T76 1030 aa17.58■□□□□ 0.41
GABRB3-215ENST00000622697 LRRC53A6NM62 1247 aa17.58■□□□□ 0.4
GABRB3-215ENST00000622697 ANKRD35Q8N283 1001 aa17.58■□□□□ 0.4
GABRB3-215ENST00000622697 GOLGA8IPA6NC78 632 aa17.58■□□□□ 0.4
GABRB3-215ENST00000622697 GOLGA8JA6NMD2 632 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms