RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 LRRC53A6NM62 1247 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 SFI1A8K8P3 1242 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 AKR1B1P15121 316 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 PKN1Q16512 942 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 SBK1Q52WX2 424 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 LRRC45Q96CN5 670 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 PRPF6O94906 941 aaKnown RBP14.1□□□□□ -0.15
MSH6-215ENST00000622629 POLD1P28340 1107 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 GBP2P32456 591 aaPredicted RBP14.1□□□□□ -0.15
MSH6-215ENST00000622629 VSNL1P62760 191 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 BIRC3Q13489 604 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 BARGINQ6ZT62 677 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 SCLT1Q96NL6 688 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 CSRNP1Q96S65 589 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 DPH5Q9H2P9 285 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 SH2D4AQ9H788 454 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 HEXIM1O94992 359 aaKnown RBP14.1□□□□□ -0.15
MSH6-215ENST00000622629 ATP1A1P05023 1023 aaKnown RBP14.1□□□□□ -0.15
MSH6-215ENST00000622629 CDC37Q16543 378 aaPredicted RBP14.1□□□□□ -0.15
MSH6-215ENST00000622629 TTC31Q49AM3 519 aaPredicted RBP14.1□□□□□ -0.15
MSH6-215ENST00000622629 ODR4Q5SWX8 454 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 PAIP2Q9BPZ3 127 aaKnown RBP14.1□□□□□ -0.15
MSH6-215ENST00000622629 BHMT2Q9H2M3 363 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 MTRF1LQ9UGC7 380 aaKnown RBP14.1□□□□□ -0.15
MSH6-215ENST00000622629 PDE6BP35913 854 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 PLCB3Q01970 1234 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 KRT71Q3SY84 523 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 RASGRP2Q7LDG7 609 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 ANO3Q9BYT9 981 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 AMFRQ9UKV5 643 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 MTUS1Q9ULD2 1270 aa14.1□□□□□ -0.15
MSH6-215ENST00000622629 POTEB3A0JP26 581 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 POTECB2RU33 542 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 CALCOCO2Q13137 446 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 SEL1L2Q5TEA6 688 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 TTBK2Q6IQ55 1244 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 POTEBQ6S5H4 581 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 RASA1P20936 1047 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 LRCH2Q5VUJ6 765 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 CHURC1Q8WUH1 139 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 METTL14Q9HCE5 456 aaKnown RBP14.09□□□□□ -0.15
MSH6-215ENST00000622629 COL5A2P05997 1499 aaPredicted RBP14.09□□□□□ -0.15
MSH6-215ENST00000622629 CACNA1FO60840 1977 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 hCG_1984214I3L0E3 225 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 ACTN2P35609 894 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 KCNB1Q14721 858 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 CCDC121Q6ZUS5 278 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 GSTA5Q7RTV2 222 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 ZNF713Q8N859 430 aaPredicted RBP14.09□□□□□ -0.15
MSH6-215ENST00000622629 GOLGA5Q8TBA6 731 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 EXOC4Q96A65 974 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 MKRN1Q9UHC7 482 aaKnown RBP14.09□□□□□ -0.15
MSH6-215ENST00000622629 ANKRD65E5RJM6 399 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 FOSP01100 380 aaPredicted RBP14.09□□□□□ -0.15
MSH6-215ENST00000622629 GFPT1Q06210 699 aaPredicted RBP14.09□□□□□ -0.15
MSH6-215ENST00000622629 NLGN1Q8N2Q7 840 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 CCDC127Q96BQ5 260 aa14.09□□□□□ -0.15
MSH6-215ENST00000622629 NAP1L3Q99457 506 aaPredicted RBP14.09□□□□□ -0.15
MSH6-215ENST00000622629 PPANQ9NQ55 473 aaKnown RBP14.09□□□□□ -0.15
MSH6-215ENST00000622629 RGPD8O14715 1765 aaPredicted RBP14.08□□□□□ -0.15
MSH6-215ENST00000622629 POLR2MP0CAP2 368 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 BCRP11274 1271 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 BMP6P22004 513 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 LLGL1Q15334 1064 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 JDP2Q8WYK2 163 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 CCDC114Q96M63 670 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 CAPN11Q9UMQ6 739 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 A0A087X0B3 334 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 ALAS1P13196 640 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 CTNNA1P35221 906 aaKnown RBP14.08□□□□□ -0.16
MSH6-215ENST00000622629 SYCE1Q8N0S2 351 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 STXBP3O00186 592 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 ZBTB5O15062 677 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 NCK2O43639 380 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 LRRN2O75325 713 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 SMTNP53814 917 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 PSMD2Q13200 908 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 MIER3Q7Z3K6 550 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 HOOK3Q86VS8 718 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 CAPS2Q9BXY5 557 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 COA1Q9GZY4 146 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 PI4KBQ9UBF8 816 aa14.08□□□□□ -0.16
MSH6-215ENST00000622629 ATF5Q9Y2D1 282 aaPredicted RBP14.08□□□□□ -0.16
MSH6-215ENST00000622629 PVALEFA0A1B0GWK0 134 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 A0A1W2PQC6 194 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 AFPP02771 609 aaKnown RBP14.07□□□□□ -0.16
MSH6-215ENST00000622629 BMP3P12645 472 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 KLK7P49862 253 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 NFRKBQ6P4R8 1299 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 PTF1AQ7RTS3 328 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 FMNL3Q8IVF7 1028 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 ADGRF4Q8IZF3 695 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 UHMK1Q8TAS1 419 aaKnown RBP14.07□□□□□ -0.16
MSH6-215ENST00000622629 PIGOQ8TEQ8 1089 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 FNBP1Q96RU3 617 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 SUGCTQ9HAC7 445 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 FAM184BQ9ULE4 1060 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 STK24Q9Y6E0 443 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 NFAT5O94916 1531 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 K7ENM7 598 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms