RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 EDNRBP24530 442 aa20.12■□□□□ 0.81
PTCHD3-202ENST00000622555 CCDC73Q6ZRK6 1079 aa20.12■□□□□ 0.81
PTCHD3-202ENST00000622555 NLRX1Q86UT6 975 aa20.12■□□□□ 0.81
PTCHD3-202ENST00000622555 ZNF577Q9BSK1 485 aa20.12■□□□□ 0.81
PTCHD3-202ENST00000622555 CFHR5Q9BXR6 569 aa20.12■□□□□ 0.81
PTCHD3-202ENST00000622555 GOLPH3LQ9H4A5 285 aa20.12■□□□□ 0.81
PTCHD3-202ENST00000622555 KCNH7Q9NS40 1196 aa20.12■□□□□ 0.81
PTCHD3-202ENST00000622555 PCDHA12Q9UN75 941 aa20.12■□□□□ 0.81
PTCHD3-202ENST00000622555 A0A1B0GVL5 298 aa20.11■□□□□ 0.81
PTCHD3-202ENST00000622555 EIF3JO75822 258 aaKnown RBP20.11■□□□□ 0.81
PTCHD3-202ENST00000622555 LIG1P18858 919 aa20.11■□□□□ 0.81
PTCHD3-202ENST00000622555 FXR2P51116 673 aaKnown RBP eCLIP20.11■□□□□ 0.81
PTCHD3-202ENST00000622555 MORN1Q5T089 497 aa20.11■□□□□ 0.81
PTCHD3-202ENST00000622555 GPRASP2Q96D09 838 aa20.11■□□□□ 0.81
PTCHD3-202ENST00000622555 INPP4AQ96PE3 977 aaPredicted RBP20.11■□□□□ 0.81
PTCHD3-202ENST00000622555 SLC5A4Q9NY91 659 aa20.11■□□□□ 0.81
PTCHD3-202ENST00000622555 LOC102724159A0A0B4J2E5 919 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 ASB14A6NK59 587 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 FCGRTP55899 365 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 LACTBP83111 547 aaPredicted RBP20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 PWP2Q15269 919 aaKnown RBP20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 GNPTABQ3T906 1256 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 SYMPKQ92797 1274 aaKnown RBP20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 SLC5A5Q92911 643 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 RAB34Q9BZG1 259 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 FAM13BQ9NYF5 915 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 PKD2L1Q9P0L9 805 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 IPO5O00410 1097 aaKnown RBP20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 RGS20O76081 388 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 PFKFB1P16118 471 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 MAP2K5Q13163 448 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 KLHL40Q2TBA0 621 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 USP49Q70CQ1 688 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 EPSTI1Q96J88 318 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 NUDT12Q9BQG2 462 aa20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 AGO4Q9HCK5 861 aaKnown RBP20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 DIS3Q9Y2L1 958 aaKnown RBP20.1■□□□□ 0.81
PTCHD3-202ENST00000622555 CTGFP29279 349 aa20.09■□□□□ 0.81
PTCHD3-202ENST00000622555 PSMC4P43686 418 aa20.09■□□□□ 0.81
PTCHD3-202ENST00000622555 NDUFA8P51970 172 aa20.09■□□□□ 0.81
PTCHD3-202ENST00000622555 SP3Q02447 781 aa20.09■□□□□ 0.81
PTCHD3-202ENST00000622555 LRCH2Q5VUJ6 765 aa20.09■□□□□ 0.81
PTCHD3-202ENST00000622555 ZNF467Q7Z7K2 595 aaPredicted RBP20.09■□□□□ 0.81
PTCHD3-202ENST00000622555 IGSF22Q8N9C0 903 aa20.09■□□□□ 0.81
PTCHD3-202ENST00000622555 AK8Q96MA6 479 aa20.09■□□□□ 0.81
PTCHD3-202ENST00000622555 ARHGAP39Q9C0H5 1083 aa20.09■□□□□ 0.81
PTCHD3-202ENST00000622555 LRWD1Q9UFC0 647 aa20.09■□□□□ 0.81
PTCHD3-202ENST00000622555 POTEMA6NI47 508 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 PP2D1A8MPX8 630 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 GAS7O60861 476 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 CDC25AP30304 524 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 FAM160A1Q05DH4 1040 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 PDIA5Q14554 519 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 KIF22Q14807 665 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 SEPT14Q6ZU15 432 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 ARMCX2Q7L311 632 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 EEPD1Q7L9B9 569 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 NPLOC4Q8TAT6 608 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 MORC4Q8TE76 937 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 SOCS4Q8WXH5 440 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 CDHR1Q96JP9 859 aa20.08■□□□□ 0.81
PTCHD3-202ENST00000622555 DOCK5Q9H7D0 1870 aa20.08■□□□□ 0.8
PTCHD3-202ENST00000622555 MAFGO15525 162 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 NR1I2O75469 434 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 PSMD10O75832 226 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 TXLNAP40222 546 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 SEMA3FQ13275 785 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 MAML3Q96JK9 1138 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 TRIM47Q96LD4 638 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 KCNH3Q9ULD8 1083 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 HPSEQ9Y251 543 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 FAM237AA0A1B0GTK4 181 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 RGS2P41220 211 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 UBA7P41226 1012 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 SYKP43405 635 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 USP6NLQ92738 828 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 RIT2Q99578 217 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 TEKT3Q9BXF9 490 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 DACT1Q9NYF0 836 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 GJD2Q9UKL4 321 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 VAV3Q9UKW4 847 aa20.07■□□□□ 0.8
PTCHD3-202ENST00000622555 SPATA31C2B4DYI2 1134 aa20.06■□□□□ 0.8
PTCHD3-202ENST00000622555 DDX39AO00148 427 aaKnown RBP20.06■□□□□ 0.8
PTCHD3-202ENST00000622555 ITGB3BPQ13352 177 aaPredicted RBP20.06■□□□□ 0.8
PTCHD3-202ENST00000622555 NCAPH2Q6IBW4 605 aa20.06■□□□□ 0.8
PTCHD3-202ENST00000622555 FMR1NBQ8N0W7 255 aaPredicted RBP20.06■□□□□ 0.8
PTCHD3-202ENST00000622555 ENGASEQ8NFI3 743 aa20.06■□□□□ 0.8
PTCHD3-202ENST00000622555 SAGE1Q9NXZ1 904 aa20.06■□□□□ 0.8
PTCHD3-202ENST00000622555 ATP9AO75110 1047 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 HOXC6P09630 235 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 CYP2B6P20813 491 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 ICAM3P32942 547 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 SPIRE1Q08AE8 756 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 SNW1Q13573 536 aaKnown RBP20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 CAVIN1Q6NZI2 390 aaKnown RBP20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 MAMDC4Q6UXC1 1216 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 CABP7Q86V35 215 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 FBXO16Q8IX29 292 aaPredicted RBP20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 PDILTQ8N807 584 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 RASSF8Q8NHQ8 419 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms