RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 GPR19Q15760 415 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 HSF5Q4G112 596 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-213ENST00000622183 MROH9Q5TGP6 573 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 CEP128Q6ZU80 1094 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 C11orf74Q86VG3 221 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 VSIG10LQ86VR7 867 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 LZTR1Q8N653 840 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 CHTF18Q8WVB6 975 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 GPR101Q96P66 508 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-213ENST00000622183 BOCQ9BWV1 1114 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 SMURF1Q9HCE7 757 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 EMC7Q9NPA0 242 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 CHPF2Q9P2E5 772 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 COA3Q9Y2R0 106 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-213ENST00000622183 EID1Q9Y6B2 187 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 TAF6LQ9Y6J9 622 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 DGKIO75912 1065 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 AMY2AP04746 511 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 FURINP09958 794 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 AMY2BP19961 511 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 KPNA1P52294 538 aaPredicted RBP6.68□□□□□ -1.34
CPNE3-213ENST00000622183 EPHB1P54762 984 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 JAM2P57087 298 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 ITKQ08881 620 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 TTF1Q15361 905 aaPredicted RBP6.68□□□□□ -1.34
CPNE3-213ENST00000622183 ATP13A4Q4VNC1 1196 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 CREB3L3Q68CJ9 461 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 GALNT18Q6P9A2 607 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 HHIPL2Q6UWX4 724 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 ZNF574Q6ZN55 896 aaPredicted RBP6.68□□□□□ -1.34
CPNE3-213ENST00000622183 ARHGAP36Q6ZRI8 547 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 OTOP3Q7RTS5 596 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 OSTM1Q86WC4 334 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 COG1Q8WTW3 980 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 MTMR8Q96EF0 704 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 CCDC120Q96HB5 630 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 TRIM8Q9BZR9 551 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 SEMA6BQ9H3T3 888 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 PDLIM7Q9NR12 457 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 SPTLC3Q9NUV7 552 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 OXSMQ9NWU1 459 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 IMPACTQ9P2X3 320 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 RWDD3Q9Y3V2 267 aa6.68□□□□□ -1.34
CPNE3-213ENST00000622183 NOTOA8MTQ0 251 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 MVKQ03426 396 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 SLC14A2Q15849 920 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 CCDC181Q5TID7 509 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 DTX1Q86Y01 620 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 SPPL2CQ8IUH8 684 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 EFHBQ8N7U6 833 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 CNTD1Q8N815 330 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 PDZD8Q8NEN9 1154 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 USP33Q8TEY7 942 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.67□□□□□ -1.34
CPNE3-213ENST00000622183 SCYL1Q96KG9 808 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 MENTQ9BUN1 341 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 SLC6A20Q9NP91 592 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 FBLN5Q9UBX5 448 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 ACSL6Q9UKU0 697 aa6.67□□□□□ -1.34
CPNE3-213ENST00000622183 A0A1W2PQ27 194 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 A0A1W2PQ64 194 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 A0A1W2PQC6 194 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 A0A1W2PQD8 194 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 TCRBV5S4A2TA0A5A2 114 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 SLC12A8A0AV02 714 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 K7ESF4 209 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 NKRFO15226 690 aaKnown RBP eCLIP6.66□□□□□ -1.34
CPNE3-213ENST00000622183 NRDCO43847 1150 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 ULK1O75385 1050 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 COL6A2P12110 1019 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 KRT15P19012 456 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 SPINK2P20155 84 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 FUT4P22083 530 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 CD97P48960 835 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 FAPQ12884 760 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 NR0B2Q15466 257 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 FIGNQ5HY92 759 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 SYDE2Q5VT97 1194 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 IQSEC1Q6DN90 963 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 SLC23A3Q6PIS1 610 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 PTRH1Q86Y79 214 aaKnown RBP6.66□□□□□ -1.34
CPNE3-213ENST00000622183 OXR1Q8N573 874 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 PIP4K2CQ8TBX8 421 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 CCDC8Q9H0W5 538 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-213ENST00000622183 CCDC39Q9UFE4 941 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 TCEAL9Q9UHQ7 104 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 TRHDEQ9UKU6 1024 aa6.66□□□□□ -1.34
CPNE3-213ENST00000622183 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-213ENST00000622183 FITM1A5D6W6 292 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 KIAA1324LA8MWY0 1029 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-213ENST00000622183 H7C1D1 291 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 KRIT1O00522 736 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 MAN2B1O00754 1011 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 PRKD3O94806 890 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 MED26O95402 600 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 MSL3P1P0C860 447 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 ZBTB48P10074 688 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-213ENST00000622183 NEK2P51955 445 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 HK2P52789 917 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 SESN3P58005 492 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms