RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 MPHOSPH6Q99547 160 aaKnown RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 GPR20Q99678 358 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 RIOK1Q9BRS2 568 aaKnown RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 KATNAL1Q9BW62 490 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 OSBPL6Q9BZF3 934 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 EPC1Q9H2F5 836 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 RC3H2Q9HBD1 1191 aaKnown RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 RAVER2Q9HCJ3 691 aaKnown RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 ERVK-5Q9HDB9 667 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 NGRNQ9NPE2 291 aaKnown RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 SMC4Q9NTJ3 1288 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 ZSCAN32Q9NX65 697 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 MCM9Q9NXL9 1143 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 CYP39A1Q9NYL5 469 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 HDAC6Q9UBN7 1215 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 PUF60Q9UHX1 559 aaKnown RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 PNMA2Q9UL42 364 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 BARX2Q9UMQ3 279 aaPredicted RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 LHX6Q9UPM6 363 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 LZTS1Q9Y250 596 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 ASPMQ8IZT6 3477 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 PHIPQ8WWQ0 1821 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 ZNF236Q9UL36 1845 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 HELZ2Q9BYK8 2649 aaKnown RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 NAV2Q8IVL1 2488 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 GCN1Q92616 2671 aaKnown RBP2.85□□□□□ -1.95
CPNE3-211ENST00000621526 SRRM3A6NNA2 597 aaPredicted RBP2.85□□□□□ -1.95
CPNE3-211ENST00000621526 STK25O00506 426 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 FSCN2O14926 492 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 PER2O15055 1255 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 RETP07949 1114 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 MMP3P08254 477 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 TXNP10599 105 aaKnown RBP2.85□□□□□ -1.95
CPNE3-211ENST00000621526 GNAT1P11488 350 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 AKR1B1P15121 316 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 EDNRBP24530 442 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 THPOP40225 353 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 TECP42680 631 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 MAGEA9P43362 315 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 SLC4A3P48751 1232 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 CDK8P49336 464 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 NRLP54845 237 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 STARD6P59095 220 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 PLCB3Q01970 1234 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 EXOSC9Q06265 439 aaKnown RBP2.85□□□□□ -1.95
CPNE3-211ENST00000621526 MTX1Q13505 466 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 LAMC2Q13753 1193 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 PPP2R5BQ15173 497 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 CSRP2Q16527 193 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 C12orf60Q5U649 245 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 PI16Q6UXB8 463 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 UNQ6494/PRO21346Q6UXR6 183 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 PRR23BQ6ZRT6 265 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 EEPD1Q7L9B9 569 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 OTOP3Q7RTS5 596 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 FAM160B2Q86V87 743 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 FBXO16Q8IX29 292 aaPredicted RBP2.85□□□□□ -1.95
CPNE3-211ENST00000621526 SIX5Q8N196 739 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 RGS22Q8NE09 1264 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 DNERQ8NFT8 737 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 VN1R2Q8NFZ6 395 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 STAG1Q8WVM7 1258 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 CASP10Q92851 521 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 EMID1Q96A84 441 aaPredicted RBP2.85□□□□□ -1.95
CPNE3-211ENST00000621526 KIFC2Q96AC6 838 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 SHDQ96IW2 340 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 NELL2Q99435 816 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 CRNKL1Q9BZJ0 848 aaKnown RBP2.85□□□□□ -1.95
CPNE3-211ENST00000621526 CCDC8Q9H0W5 538 aaPredicted RBP2.85□□□□□ -1.95
CPNE3-211ENST00000621526 EHMT1Q9H9B1 1298 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 KCNK12Q9HB15 430 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 DCP1AQ9NPI6 582 aaPredicted RBP2.85□□□□□ -1.95
CPNE3-211ENST00000621526 AAASQ9NRG9 546 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 ATP8A2Q9NTI2 1148 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 CACNA2D2Q9NY47 1150 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 DACH1Q9UI36 760 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 FBXL21Q9UKT6 434 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 DUSP12Q9UNI6 340 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 PCDHB12Q9Y5F1 795 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 SQORQ9Y6N5 450 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 PLXNA3P51805 1871 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 PTPRCP08575 1304 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 PTPRFP10586 1907 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 CEP295Q9C0D2 2601 aa2.85□□□□□ -1.95
CPNE3-211ENST00000621526 DOCK1Q14185 1865 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 FRYQ5TBA9 3013 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 MAGEB6P1A0A0J9YX57 407 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 KRBA1A5PL33 1030 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 C1QTNF9BB2RNN3 333 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 TK2O00142 265 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 LAMTOR5O43504 91 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 EOMESO95936 686 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 NDUFB10O96000 172 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 F2P00734 622 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 GH1P01241 217 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 RPLP2P05387 115 aaKnown RBP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 ASGR2P07307 311 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 C1QTNF9P0C862 333 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 UBTFL1P0CB47 393 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms