RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 AFPP02771 609 aaKnown RBP5.46□□□□□ -1.54
VPS13D-214ENST00000620676 PYGBP11216 843 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 EMBQ6PCB8 327 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 HIC2Q96JB3 615 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 HAUS4Q9H6D7 363 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 PANK4Q9NVE7 773 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 HAO1Q9UJM8 370 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 NCKAP5LQ9HCH0 1330 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 A0A1W2PQ27 194 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 A0A1W2PQ64 194 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 A0A1W2PQD8 194 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 CFAP73A6NFT4 308 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 GOLGA8RI6L899 631 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 TRIM25Q14258 630 aaKnown RBP5.46□□□□□ -1.54
VPS13D-214ENST00000620676 ZIM3Q96PE6 472 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 BCS1LQ9Y276 419 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.46□□□□□ -1.547e-6■□□□□ 11.1
VPS13D-214ENST00000620676 MCF2LO15068 1137 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 PITPNM3Q9BZ71 974 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 SH2D4AQ9H788 454 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 GDAQ9Y2T3 454 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 CDK13Q14004 1512 aaKnown RBP5.46□□□□□ -1.54
VPS13D-214ENST00000620676 MAN1A2O60476 641 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 MT-ND3P03897 115 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 MAP3K12Q12852 859 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 RASGRP4Q8TDF6 673 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 TUBGCP2Q9BSJ2 902 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 TEKT2Q9UIF3 430 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 ZNF180Q9UJW8 692 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 KIF28PB7ZC32 967 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 HARSP12081 509 aaKnown RBP5.46□□□□□ -1.54
VPS13D-214ENST00000620676 GSTT1P30711 240 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 SLC8A3P57103 927 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 CCDC89Q8N998 374 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 AMOTL2Q9Y2J4 779 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 PCDHB6Q9Y5E3 794 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 ESRRGP62508 458 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 KCNJ2P63252 427 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 ELF3P78545 371 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-214ENST00000620676 SREK1Q8WXA9 508 aaKnown RBP5.46□□□□□ -1.54
VPS13D-214ENST00000620676 SUCLG2Q96I99 432 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 TMEM237Q96Q45 408 aa5.46□□□□□ -1.54
VPS13D-214ENST00000620676 CYP2E1P05181 493 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 PLCG2P16885 1265 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 NOP14P78316 857 aaKnown RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 RSRC2Q7L4I2 434 aaKnown RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 PALM2Q8IXS6 379 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 SPATA4Q8NEY3 305 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 PHACTR1Q9C0D0 580 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 ARHGEF38Q9NXL2 777 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 NDE1Q9NXR1 346 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 LONRF1Q17RB8 773 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 CNOT6LQ96LI5 555 aaKnown RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 FAM118BQ9BPY3 351 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 MBD4O95243 580 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 CYP7A1P22680 504 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 TBC1D10BQ4KMP7 808 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 ZSCAN29Q8IWY8 852 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 C1orf54Q8WWF1 131 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 PYM1Q9BRP8 204 aaKnown RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 DSEQ9UL01 958 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 COMMD10Q9Y6G5 202 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 ATF7P17544 494 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 MAP3K7CLP57077 242 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 SLC39A14Q15043 492 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 KBTBD12Q3ZCT8 623 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 LRGUKQ96M69 825 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 ARPP19P56211 112 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 UBE3AQ05086 875 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 ARHGEF25Q86VW2 580 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 PPP1R14BQ96C90 147 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 C15orf41Q9Y2V0 281 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 CCDC189A1A4V9 331 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 CCND1P24385 295 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 ARHGAP4P98171 946 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 CNNM4Q6P4Q7 775 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 CATSPER3Q86XQ3 398 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 LINC00301Q8NCQ3 95 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 NLRP7Q8WX94 980 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 TCP1P17987 556 aaKnown RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 JPH4Q96JJ6 628 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 EIF6P56537 245 aaKnown RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 FAM47AQ5JRC9 791 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 EPM2AIP1Q7L775 607 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 ICA1LQ8NDH6 482 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 DCTN3O75935 186 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 SLC1A4P43007 532 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 OTUD4Q01804 1114 aaKnown RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 HERC4Q5GLZ8 1057 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 HABP4Q5JVS0 413 aaKnown RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 RASGRP2Q7LDG7 609 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 HEMGNQ9BXL5 484 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 CELF4Q9BZC1 486 aaKnown RBP5.45□□□□□ -1.54
VPS13D-214ENST00000620676 KIF21AQ7Z4S6 1674 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 PMS2P54278 862 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 CETN1Q12798 172 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 CYGBQ8WWM9 190 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 SCYL1Q96KG9 808 aa5.45□□□□□ -1.54
VPS13D-214ENST00000620676 ART3Q13508 389 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms