RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 PWP2Q15269 919 aaKnown RBP15.52■□□□□ 0.07
NEK3-210ENST00000620675 CCDC62Q6P9F0 684 aa15.52■□□□□ 0.07
NEK3-210ENST00000620675 EHMT1Q9H9B1 1298 aa15.52■□□□□ 0.07
NEK3-210ENST00000620675 MRVI1Q9Y6F6 885 aa15.52■□□□□ 0.07
NEK3-210ENST00000620675 ZSCAN22P10073 491 aaPredicted RBP15.51■□□□□ 0.07
NEK3-210ENST00000620675 CIITAP33076 1130 aa15.51■□□□□ 0.07
NEK3-210ENST00000620675 ZNF76P36508 570 aa15.51■□□□□ 0.07
NEK3-210ENST00000620675 USP11P51784 963 aa15.51■□□□□ 0.07
NEK3-210ENST00000620675 ARMC5Q96C12 935 aa15.51■□□□□ 0.07
NEK3-210ENST00000620675 IPO9Q96P70 1041 aaKnown RBP15.51■□□□□ 0.07
NEK3-210ENST00000620675 JADE2Q9NQC1 790 aa15.51■□□□□ 0.07
NEK3-210ENST00000620675 KCNH7Q9NS40 1196 aa15.51■□□□□ 0.07
NEK3-210ENST00000620675 PCDHB6Q9Y5E3 794 aa15.51■□□□□ 0.07
NEK3-210ENST00000620675 RBM47A0AV96 593 aaKnown RBP15.5■□□□□ 0.07
NEK3-210ENST00000620675 BRD1O95696 1058 aa15.5■□□□□ 0.07
NEK3-210ENST00000620675 CCL5P13501 91 aa15.5■□□□□ 0.07
NEK3-210ENST00000620675 ZNF174Q15697 407 aa15.5■□□□□ 0.07
NEK3-210ENST00000620675 MCTP2Q6DN12 878 aa15.5■□□□□ 0.07
NEK3-210ENST00000620675 PLA2G4DQ86XP0 818 aa15.5■□□□□ 0.07
NEK3-210ENST00000620675 DAXXQ9UER7 740 aaPredicted RBP15.5■□□□□ 0.07
NEK3-210ENST00000620675 UBA1P22314 1058 aaKnown RBP15.5■□□□□ 0.07
NEK3-210ENST00000620675 MCM7P33993 719 aa15.5■□□□□ 0.07
NEK3-210ENST00000620675 ITGB3BPQ13352 177 aaPredicted RBP15.5■□□□□ 0.07
NEK3-210ENST00000620675 MTMR1Q13613 665 aa15.5■□□□□ 0.07
NEK3-210ENST00000620675 MYSM1Q5VVJ2 828 aa15.5■□□□□ 0.07
NEK3-210ENST00000620675 XRRA1Q6P2D8 792 aa15.5■□□□□ 0.07
NEK3-210ENST00000620675 MBOAT7Q96N66 472 aa15.5■□□□□ 0.07
NEK3-210ENST00000620675 MPHOSPH6Q99547 160 aaKnown RBP15.5■□□□□ 0.07
NEK3-210ENST00000620675 TMEM60Q9H2L4 133 aa15.5■□□□□ 0.07
NEK3-210ENST00000620675 DDX41Q9UJV9 622 aaKnown RBP15.5■□□□□ 0.07
NEK3-210ENST00000620675 MYH9P35579 1960 aaKnown RBP15.49■□□□□ 0.07
NEK3-210ENST00000620675 CYP3A7-CYP3A51PA0A087WV96 503 aa15.49■□□□□ 0.07
NEK3-210ENST00000620675 B4DLN1 442 aa15.49■□□□□ 0.07
NEK3-210ENST00000620675 SPATA31C2B4DYI2 1134 aa15.49■□□□□ 0.07
NEK3-210ENST00000620675 SEPT4O43236 478 aa15.49■□□□□ 0.07
NEK3-210ENST00000620675 F13A1P00488 732 aa15.49■□□□□ 0.07
NEK3-210ENST00000620675 TXNP10599 105 aaKnown RBP15.49■□□□□ 0.07
NEK3-210ENST00000620675 CYP3A7P24462 503 aa15.49■□□□□ 0.07
NEK3-210ENST00000620675 LHX8Q68G74 356 aa15.49■□□□□ 0.07
NEK3-210ENST00000620675 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.49■□□□□ 0.071e-5■■■□□ 18
NEK3-210ENST00000620675 RNF208Q9H0X6 261 aa15.49■□□□□ 0.07
NEK3-210ENST00000620675 HMX1Q9NP08 348 aaPredicted RBP15.49■□□□□ 0.07
NEK3-210ENST00000620675 MSH4O15457 936 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 KCNA2P16389 499 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 TNFAIP2Q03169 654 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 TTC38Q5R3I4 469 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 SCFD2Q8WU76 684 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 GPRASP2Q96D09 838 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 AGO4Q9HCK5 861 aaKnown RBP15.48■□□□□ 0.07
NEK3-210ENST00000620675 PAK6Q9NQU5 681 aaPredicted RBP15.48■□□□□ 0.07
NEK3-210ENST00000620675 DDX25Q9UHL0 483 aaKnown RBP15.48■□□□□ 0.07
NEK3-210ENST00000620675 GNEQ9Y223 722 aaKnown RBP15.48■□□□□ 0.07
NEK3-210ENST00000620675 MYADML2A6NDP7 307 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 FIBPO43427 364 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 AKR1A1P14550 325 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 ICAM3P32942 547 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 PPP4R3AQ6IN85 833 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 HAS1Q92839 578 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 DEFB118Q96PH6 123 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 FAM184BQ9ULE4 1060 aa15.48■□□□□ 0.07
NEK3-210ENST00000620675 STAM2O75886 525 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 PGK1P00558 417 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 TTLL4Q14679 1199 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 GNPTABQ3T906 1256 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 Q4G0T1 1027 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 DUSP28Q4G0W2 176 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 CYFIP1Q7L576 1253 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 BRAPQ7Z569 592 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 NLRX1Q86UT6 975 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 ETNPPLQ8TBG4 499 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 DDX20Q9UHI6 824 aaKnown RBP15.47■□□□□ 0.07
NEK3-210ENST00000620675 NRBP1Q9UHY1 535 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 DDX39AO00148 427 aaKnown RBP15.47■□□□□ 0.07
NEK3-210ENST00000620675 CTAGE5O15320 804 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 DHX15O43143 795 aaKnown RBP15.47■□□□□ 0.07
NEK3-210ENST00000620675 GGPS1O95749 300 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 SP4Q02446 784 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 CEBPZQ03701 1054 aaKnown RBP15.47■□□□□ 0.07
NEK3-210ENST00000620675 ARHGAP1Q07960 439 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 IQSEC1Q6DN90 963 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 C4orf32Q8N8J7 132 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 CLIC4Q9Y696 253 aa15.47■□□□□ 0.07
NEK3-210ENST00000620675 TRIP12Q14669 1992 aaPredicted RBP15.46■□□□□ 0.07
NEK3-210ENST00000620675 DYNC1LI2O43237 492 aaPredicted RBP15.46■□□□□ 0.07
NEK3-210ENST00000620675 BEX3Q00994 111 aa15.46■□□□□ 0.07
NEK3-210ENST00000620675 MOXD1Q6UVY6 613 aa15.46■□□□□ 0.07
NEK3-210ENST00000620675 NIPA1Q7RTP0 329 aa15.46■□□□□ 0.07
NEK3-210ENST00000620675 USP28Q96RU2 1077 aa15.46■□□□□ 0.07
NEK3-210ENST00000620675 ZNF577Q9BSK1 485 aa15.46■□□□□ 0.07
NEK3-210ENST00000620675 KCNMB3Q9NPA1 279 aa15.46■□□□□ 0.07
NEK3-210ENST00000620675 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.46■□□□□ 0.07
NEK3-210ENST00000620675 TFIP11Q9UBB9 837 aaKnown RBP15.46■□□□□ 0.07
NEK3-210ENST00000620675 SYNRGQ9UMZ2 1314 aa15.46■□□□□ 0.06
NEK3-210ENST00000620675 IPO5O00410 1097 aaKnown RBP15.45■□□□□ 0.06
NEK3-210ENST00000620675 HSDL1Q3SXM5 330 aa15.45■□□□□ 0.06
NEK3-210ENST00000620675 RILPL1Q5EBL4 403 aa15.45■□□□□ 0.06
NEK3-210ENST00000620675 TLK2Q86UE8 772 aa15.45■□□□□ 0.06
NEK3-210ENST00000620675 NOL7Q9UMY1 257 aaKnown RBP15.45■□□□□ 0.06
NEK3-210ENST00000620675 NEMFO60524 1076 aa15.45■□□□□ 0.06
NEK3-210ENST00000620675 FARP2O94887 1054 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms