RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 FSCN1Q16658 493 aaKnown RBP12.34□□□□□ -0.43
TARDBP-223ENST00000620632 LRRC26Q2I0M4 334 aa12.34□□□□□ -0.43
TARDBP-223ENST00000620632 GNASQ5JWF2 1037 aa12.34□□□□□ -0.43
TARDBP-223ENST00000620632 TEX2Q8IWB9 1127 aa12.34□□□□□ -0.43
TARDBP-223ENST00000620632 BLIDQ8IZY5 108 aa12.34□□□□□ -0.43
TARDBP-223ENST00000620632 LLPHQ9BRT6 129 aaKnown RBP12.34□□□□□ -0.43
TARDBP-223ENST00000620632 TRIP12Q14669 1992 aaPredicted RBP12.33□□□□□ -0.44
TARDBP-223ENST00000620632 FAM86B1E9PN63 330 aa12.33□□□□□ -0.44
TARDBP-223ENST00000620632 FIBPO43427 364 aa12.33□□□□□ -0.44
TARDBP-223ENST00000620632 GH1P01241 217 aa12.33□□□□□ -0.44
TARDBP-223ENST00000620632 FAM86B2P0C5J1 330 aa12.33□□□□□ -0.44
TARDBP-223ENST00000620632 ATN1P54259 1190 aaPredicted RBP12.33□□□□□ -0.44
TARDBP-223ENST00000620632 EARS2Q5JPH6 523 aaKnown RBP12.33□□□□□ -0.44
TARDBP-223ENST00000620632 XRRA1Q6P2D8 792 aa12.33□□□□□ -0.44
TARDBP-223ENST00000620632 BICD2Q8TD16 824 aa12.33□□□□□ -0.44
TARDBP-223ENST00000620632 AFG1LQ8WV93 481 aa12.33□□□□□ -0.44
TARDBP-223ENST00000620632 TNFRSF25Q93038 417 aa12.33□□□□□ -0.44
TARDBP-223ENST00000620632 MXRA8Q9BRK3 442 aa12.33□□□□□ -0.44
TARDBP-223ENST00000620632 TSEN34Q9BSV6 310 aaKnown RBP12.33□□□□□ -0.44
TARDBP-223ENST00000620632 AP5M1Q9H0R1 490 aa12.33□□□□□ -0.44
TARDBP-223ENST00000620632 EHMT1Q9H9B1 1298 aa12.33□□□□□ -0.44
TARDBP-223ENST00000620632 JADE2Q9NQC1 790 aa12.33□□□□□ -0.44
TARDBP-223ENST00000620632 IGLV3-22A0A075B6J6 115 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 FAM205CA6NFA0 338 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 MOXD2PA6NHM9 499 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 A6NJR5 290 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 GGPS1O95749 300 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 MMP3P08254 477 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 CYP3A4P08684 503 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 ARP10275 920 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 KCNA2P16389 499 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 GUCY1B3Q02153 619 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 NR5A1Q13285 461 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 SNX17Q15036 470 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 HSDL1Q3SXM5 330 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 GNPTABQ3T906 1256 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 CELF3Q5SZQ8 465 aaKnown RBP12.32□□□□□ -0.44
TARDBP-223ENST00000620632 MYSM1Q5VVJ2 828 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 KRT40Q6A162 431 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 CXCL17Q6UXB2 119 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 SLC39A5Q6ZMH5 540 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 FAM177A1Q8N128 213 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-223ENST00000620632 IL27Q8NEV9 243 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 PPP1R13LQ8WUF5 828 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 WASF1Q92558 559 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 EMID1Q96A84 441 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-223ENST00000620632 GPRASP2Q96D09 838 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 SPC25Q9HBM1 224 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 PKD2L1Q9P0L9 805 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 GRIN2DO15399 1336 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 LTBP2Q14767 1821 aa12.32□□□□□ -0.44
TARDBP-223ENST00000620632 MEIS1O00470 390 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 MMP1P03956 469 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 TGFB3P10600 412 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 MCM2P49736 904 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 PSMC6P62333 389 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 PURAQ00577 322 aaKnown RBP12.31□□□□□ -0.44
TARDBP-223ENST00000620632 MTMR1Q13613 665 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 CEP55Q53EZ4 464 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 GALNT17Q6IS24 598 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 KCNV1Q6PIU1 500 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 CYFIP1Q7L576 1253 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 NLRX1Q86UT6 975 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 DHX37Q8IY37 1157 aaKnown RBP12.31□□□□□ -0.44
TARDBP-223ENST00000620632 PCSK9Q8NBP7 692 aaKnown RBP12.31□□□□□ -0.44
TARDBP-223ENST00000620632 TBCKQ8TEA7 893 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 LENG9Q96B70 501 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 UIMC1Q96RL1 719 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 KCNH7Q9NS40 1196 aa12.31□□□□□ -0.44
TARDBP-223ENST00000620632 BTBD18B2RXH4 712 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 WNT7AO00755 349 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 MYL3P08590 195 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 HOXD8P13378 290 aaPredicted RBP12.3□□□□□ -0.44
TARDBP-223ENST00000620632 XBP1P17861 261 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 CIITAP33076 1130 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 CPT1AP50416 773 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 RTP1P59025 263 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 HMGN5P82970 282 aaKnown RBP12.3□□□□□ -0.44
TARDBP-223ENST00000620632 ITGB3BPQ13352 177 aaPredicted RBP12.3□□□□□ -0.44
TARDBP-223ENST00000620632 CUL4AQ13619 759 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 INF2Q27J81 1249 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 TRIM60Q495X7 471 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 MCTP2Q6DN12 878 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 PPTC7Q8NI37 304 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 KAT2BQ92831 832 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 SPATA33Q96N06 139 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 HTATIP2Q9BUP3 242 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 AGO4Q9HCK5 861 aaKnown RBP12.3□□□□□ -0.44
TARDBP-223ENST00000620632 STARD7Q9NQZ5 370 aa12.3□□□□□ -0.44
TARDBP-223ENST00000620632 MYH9P35579 1960 aaKnown RBP12.29□□□□□ -0.44
TARDBP-223ENST00000620632 TDP2O95551 362 aa12.29□□□□□ -0.44
TARDBP-223ENST00000620632 ZNF286BP0CG31 522 aa12.29□□□□□ -0.44
TARDBP-223ENST00000620632 KRT2P35908 639 aa12.29□□□□□ -0.44
TARDBP-223ENST00000620632 ZNF76P36508 570 aa12.29□□□□□ -0.44
TARDBP-223ENST00000620632 LAMC2Q13753 1193 aa12.29□□□□□ -0.44
TARDBP-223ENST00000620632 NONOQ15233 471 aaKnown RBP eCLIP12.29□□□□□ -0.44
TARDBP-223ENST00000620632 C1orf53Q5VUE5 145 aa12.29□□□□□ -0.44
TARDBP-223ENST00000620632 METTL7BQ6UX53 244 aa12.29□□□□□ -0.44
TARDBP-223ENST00000620632 PIK3AP1Q6ZUJ8 805 aa12.29□□□□□ -0.44
TARDBP-223ENST00000620632 NIPA1Q7RTP0 329 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms