RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 ATP2A2P16615 1042 aaKnown RBP27.71■■■□□ 2.03
ATXN3-252ENST00000620536 LIFRP42702 1097 aa27.71■■■□□ 2.03
ATXN3-252ENST00000620536 SP2Q02086 613 aa27.71■■■□□ 2.03
ATXN3-252ENST00000620536 KIAA0753Q2KHM9 967 aa27.71■■■□□ 2.03
ATXN3-252ENST00000620536 RNF20Q5VTR2 975 aa27.71■■■□□ 2.03
ATXN3-252ENST00000620536 HDAC6Q9UBN7 1215 aa27.71■■■□□ 2.03
ATXN3-252ENST00000620536 GTF2IRD1Q9UHL9 959 aa27.71■■■□□ 2.03
ATXN3-252ENST00000620536 SLC12A7Q9Y666 1083 aa27.71■■■□□ 2.03
ATXN3-252ENST00000620536 UBA1P22314 1058 aaKnown RBP27.7■■■□□ 2.02
ATXN3-252ENST00000620536 RABGGTBP53611 331 aa27.7■■■□□ 2.02
ATXN3-252ENST00000620536 HSDL1Q3SXM5 330 aa27.7■■■□□ 2.02
ATXN3-252ENST00000620536 AFAP1L1Q8TED9 768 aa27.7■■■□□ 2.02
ATXN3-252ENST00000620536 PRDM12Q9H4Q4 367 aa27.7■■■□□ 2.02
ATXN3-252ENST00000620536 YBX2Q9Y2T7 364 aaKnown RBP27.7■■■□□ 2.02
ATXN3-252ENST00000620536 PLEKHA8P1O95397 391 aa27.69■■■□□ 2.02
ATXN3-252ENST00000620536 HOXD8P13378 290 aaPredicted RBP27.69■■■□□ 2.02
ATXN3-252ENST00000620536 SKAP1Q86WV1 359 aa27.69■■■□□ 2.02
ATXN3-252ENST00000620536 SRBD1Q8N5C6 995 aaKnown RBP27.69■■■□□ 2.02
ATXN3-252ENST00000620536 PCDHA11Q9Y5I1 949 aa27.69■■■□□ 2.02
ATXN3-252ENST00000620536 FRMPD4Q14CM0 1322 aa27.68■■■□□ 2.02
ATXN3-252ENST00000620536 HAS3O00219 553 aa27.68■■■□□ 2.02
ATXN3-252ENST00000620536 RXRAP19793 462 aa27.68■■■□□ 2.02
ATXN3-252ENST00000620536 CMTR1Q8N1G2 835 aaKnown RBP27.68■■■□□ 2.02
ATXN3-252ENST00000620536 GPKOWQ92917 476 aaPredicted RBP eCLIP27.68■■■□□ 2.02
ATXN3-252ENST00000620536 CTAGE1Q96RT6 745 aa27.68■■■□□ 2.02
ATXN3-252ENST00000620536 SELPP16109 830 aa27.67■■■□□ 2.02
ATXN3-252ENST00000620536 MRPS9P82933 396 aaKnown RBP27.67■■■□□ 2.02
ATXN3-252ENST00000620536 USP17L6PQ6QN14 398 aa27.67■■■□□ 2.02
ATXN3-252ENST00000620536 SYNE3Q6ZMZ3 975 aa27.67■■■□□ 2.02
ATXN3-252ENST00000620536 LRRC2Q9BYS8 371 aa27.67■■■□□ 2.02
ATXN3-252ENST00000620536 RTEL1Q9NZ71 1219 aa27.67■■■□□ 2.02
ATXN3-252ENST00000620536 A0A0C4DFX4 3053 aa27.67■■■□□ 2.02
ATXN3-252ENST00000620536 CDH23Q9H251 3354 aa27.66■■■□□ 2.02
ATXN3-252ENST00000620536 PIK3CDO00329 1044 aa27.66■■■□□ 2.02
ATXN3-252ENST00000620536 NOP56O00567 594 aaKnown RBP27.66■■■□□ 2.02
ATXN3-252ENST00000620536 PTK7Q13308 1070 aa27.66■■■□□ 2.02
ATXN3-252ENST00000620536 COL9A3Q14050 684 aaPredicted RBP27.66■■■□□ 2.02
ATXN3-252ENST00000620536 NEDD9Q14511 834 aa27.66■■■□□ 2.02
ATXN3-252ENST00000620536 PPP2R2DQ66LE6 453 aa27.66■■■□□ 2.02
ATXN3-252ENST00000620536 LRRC8DQ7L1W4 858 aa27.66■■■□□ 2.02
ATXN3-252ENST00000620536 RAB11FIP4Q86YS3 637 aa27.66■■■□□ 2.02
ATXN3-252ENST00000620536 FANCBQ8NB91 859 aa27.66■■■□□ 2.02
ATXN3-252ENST00000620536 INPP4AQ96PE3 977 aaPredicted RBP27.66■■■□□ 2.02
ATXN3-252ENST00000620536 SLC9A7Q96T83 725 aa27.66■■■□□ 2.02
ATXN3-252ENST00000620536 UNC80Q8N2C7 3258 aa27.65■■■□□ 2.02
ATXN3-252ENST00000620536 EYSQ5T1H1 3165 aa27.65■■■□□ 2.02
ATXN3-252ENST00000620536 BAZ2BQ9UIF8 2168 aaKnown RBP27.65■■■□□ 2.02
ATXN3-252ENST00000620536 SPATA31C2B4DYI2 1134 aa27.65■■■□□ 2.02
ATXN3-252ENST00000620536 MEIS2O14770 477 aa27.65■■■□□ 2.02
ATXN3-252ENST00000620536 FIBPO43427 364 aa27.65■■■□□ 2.02
ATXN3-252ENST00000620536 PARNO95453 639 aaKnown RBP27.65■■■□□ 2.02
ATXN3-252ENST00000620536 MYOGP15173 224 aa27.65■■■□□ 2.02
ATXN3-252ENST00000620536 ICAM3P32942 547 aa27.65■■■□□ 2.02
ATXN3-252ENST00000620536 PCNX4Q63HM2 1172 aa27.65■■■□□ 2.02
ATXN3-252ENST00000620536 XRRA1Q6P2D8 792 aa27.65■■■□□ 2.02
ATXN3-252ENST00000620536 PHOSPHO2Q8TCD6 241 aa27.65■■■□□ 2.02
ATXN3-252ENST00000620536 DHX38Q92620 1227 aaKnown RBP27.65■■■□□ 2.02
ATXN3-252ENST00000620536 NEK1Q96PY6 1258 aa27.65■■■□□ 2.02
ATXN3-252ENST00000620536 PSTPIP2Q9H939 334 aa27.65■■■□□ 2.02
ATXN3-252ENST00000620536 BAIAP3O94812 1187 aa27.64■■■□□ 2.02
ATXN3-252ENST00000620536 CKBP12277 381 aa27.64■■■□□ 2.02
ATXN3-252ENST00000620536 RBL2Q08999 1139 aa27.64■■■□□ 2.02
ATXN3-252ENST00000620536 SGMS1Q86VZ5 419 aa27.64■■■□□ 2.02
ATXN3-252ENST00000620536 CCDC82Q8N4S0 544 aa27.64■■■□□ 2.02
ATXN3-252ENST00000620536 C16orf70Q9BSU1 422 aa27.64■■■□□ 2.02
ATXN3-252ENST00000620536 TANC1Q9C0D5 1861 aa27.64■■■□□ 2.01
ATXN3-252ENST00000620536 CYFIP1Q7L576 1253 aa27.63■■■□□ 2.01
ATXN3-252ENST00000620536 MICU3Q86XE3 530 aa27.63■■■□□ 2.01
ATXN3-252ENST00000620536 SCN5AQ14524 2016 aa27.63■■■□□ 2.01
ATXN3-252ENST00000620536 H3BRB1 525 aa27.62■■■□□ 2.01
ATXN3-252ENST00000620536 CDC45O75419 566 aa27.62■■■□□ 2.01
ATXN3-252ENST00000620536 IGFBP4P22692 258 aa27.62■■■□□ 2.01
ATXN3-252ENST00000620536 KCNJ6P48051 423 aa27.62■■■□□ 2.01
ATXN3-252ENST00000620536 METTL7BQ6UX53 244 aa27.62■■■□□ 2.01
ATXN3-252ENST00000620536 TMTC3Q6ZXV5 915 aa27.62■■■□□ 2.01
ATXN3-252ENST00000620536 NLRX1Q86UT6 975 aa27.62■■■□□ 2.01
ATXN3-252ENST00000620536 COL25A1Q9BXS0 654 aaPredicted RBP27.62■■■□□ 2.01
ATXN3-252ENST00000620536 TUT1Q9H6E5 874 aaKnown RBP27.62■■■□□ 2.01
ATXN3-252ENST00000620536 BCAS3Q9H6U6 928 aa27.62■■■□□ 2.01
ATXN3-252ENST00000620536 MYH7BA7E2Y1 1941 aa27.62■■■□□ 2.01
ATXN3-252ENST00000620536 hCG_1642624A0A1W2PR95 340 aa27.61■■■□□ 2.01
ATXN3-252ENST00000620536 KIF28PB7ZC32 967 aa27.61■■■□□ 2.01
ATXN3-252ENST00000620536 LGALS2P05162 132 aa27.61■■■□□ 2.01
ATXN3-252ENST00000620536 ZNF200P98182 395 aaPredicted RBP27.61■■■□□ 2.01
ATXN3-252ENST00000620536 PPM1EQ8WY54 764 aa27.61■■■□□ 2.01
ATXN3-252ENST00000620536 USP26Q9BXU7 913 aa27.61■■■□□ 2.01
ATXN3-252ENST00000620536 HEATR3Q7Z4Q2 680 aa27.6■■■□□ 2.01
ATXN3-252ENST00000620536 HERC6Q8IVU3 1022 aa27.6■■■□□ 2.01
ATXN3-252ENST00000620536 GBF1Q92538 1859 aa27.59■■■□□ 2.01
ATXN3-252ENST00000620536 C17orf102A2RUQ5 167 aa27.59■■■□□ 2.01
ATXN3-252ENST00000620536 CA3P07451 260 aa27.59■■■□□ 2.01
ATXN3-252ENST00000620536 SEMA3FQ13275 785 aa27.59■■■□□ 2.01
ATXN3-252ENST00000620536 KRT32Q14532 448 aa27.59■■■□□ 2.01
ATXN3-252ENST00000620536 GPNMBQ14956 572 aa27.59■■■□□ 2.01
ATXN3-252ENST00000620536 ZNF618Q5T7W0 954 aa27.59■■■□□ 2.01
ATXN3-252ENST00000620536 CNKSR3Q6P9H4 555 aa27.59■■■□□ 2.01
ATXN3-252ENST00000620536 DHX32Q7L7V1 743 aaKnown RBP27.59■■■□□ 2.01
ATXN3-252ENST00000620536 USP38Q8NB14 1042 aa27.59■■■□□ 2.01
ATXN3-252ENST00000620536 GIMAP8Q8ND71 665 aaPredicted RBP27.59■■■□□ 2.01
ATXN3-252ENST00000620536 GPR20Q99678 358 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms