RNA–Protein interactions for RNA: ENST00000620535.4

NOP2-223, Transcript of NOP2 nucleolar protein, human

TSL 1 (best) BASIC

Gene NOP2, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP2-223	ENST00000620535	KCTD19	Q17RG1	926 aa	Predicted RBP	12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	CRY2	Q49AN0	593 aa		12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	ASPRV1	Q53RT3	343 aa		12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	FIGN	Q5HY92	759 aa		12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	C15orf52	Q6ZUT6	534 aa	Known RBP	12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	ZFPM1	Q8IX07	1006 aa		12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	BAP1	Q92560	729 aa		12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	DNAJC19	Q96DA6	116 aa		12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	MS4A14	Q96JA4	679 aa		12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	RAB34	Q9BZG1	259 aa		12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	USP40	Q9NVE5	1235 aa		12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	HPCAL4	Q9UM19	191 aa		12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	PCDHA12	Q9UN75	941 aa		12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	PCDHAC2	Q9Y5I4	1007 aa		12.78	□□□□□ -0.36
NOP2-223	ENST00000620535	POTEB3	A0JP26	581 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	POTEC	B2RU33	542 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	USO1	O60763	962 aa	Known RBP	12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	TTLL1	O95922	423 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	NT5C2	P49902	561 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	GABPA	Q06546	454 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	NFIA	Q12857	509 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	CCDC40	Q4G0X9	1142 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	POTEB	Q6S5H4	581 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	ZNF662	Q6ZS27	426 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	MYOCD	Q8IZQ8	938 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	MTMR8	Q96EF0	704 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	SELENOO	Q9BVL4	669 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	PANK4	Q9NVE7	773 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	SERPINB13	Q9UIV8	391 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	MYH7B	A7E2Y1	1941 aa		12.77	□□□□□ -0.36
NOP2-223	ENST00000620535	PNMA6F	A0A0J9YX94	578 aa		12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	TACC1	O75410	805 aa		12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	SMARCA1	P28370	1054 aa		12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	GGCX	P38435	758 aa		12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	NOV	P48745	357 aa		12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	TCP10	Q12799	353 aa		12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	SEMA3F	Q13275	785 aa		12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	PDIA5	Q14554	519 aa		12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	CCNI2	Q6ZMN8	369 aa	Predicted RBP	12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	DNAAF5	Q86Y56	855 aa		12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	FAM163A	Q96GL9	167 aa	Predicted RBP	12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	PSTPIP2	Q9H939	334 aa		12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	RIC8A	Q9NPQ8	531 aa		12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	JRKL	Q9Y4A0	524 aa		12.77	□□□□□ -0.37
NOP2-223	ENST00000620535	UTRN	P46939	3433 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	ACTN2	P35609	894 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	RNASE9	P60153	205 aa	Known RBP	12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	CDK17	Q00537	523 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	DDR1	Q08345	913 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	TMEM119	Q4V9L6	283 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	CCDC84	Q86UT8	332 aa	Predicted RBP	12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	SLF2	Q8IX21	1173 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	TRIM58	Q8NG06	486 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	FAM71B	Q8TC56	605 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	OSBPL9	Q96SU4	736 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	ANO9	A1A5B4	782 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	SNHG28	P0DPA3	235 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	HNRNPH3	P31942	346 aa	Known RBP	12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	SHMT1	P34896	483 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	PPP1R2	P41236	205 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	POLR2F	P61218	127 aa	Known RBP	12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	LRRC63	Q05C16	580 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	CUL5	Q93034	780 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	KCNQ5	Q9NR82	932 aa		12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.76	□□□□□ -0.37
NOP2-223	ENST00000620535	FAM170A	A1A519	330 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	MEIS1	O00470	390 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	TLR2	O60603	784 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	TUBB	P07437	444 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	EHHADH	Q08426	723 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	COBLL1	Q53SF7	1204 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	HERC4	Q5GLZ8	1057 aa	Predicted RBP	12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	FAM26F	Q5R3K3	315 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	HGSNAT	Q68CP4	663 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	PDXDC1	Q6P996	788 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	SPATA4	Q8NEY3	305 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	TBC1D22A	Q8WUA7	517 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	TSG101	Q99816	390 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	TSGA10	Q9BZW7	698 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	PACSIN2	Q9UNF0	486 aa	Predicted RBP	12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	TAF1L	Q8IZX4	1826 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	IGKV6D-41	A0A0C4DH26	115 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	ANKRD65	E5RJM6	399 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	BBOX1	O75936	387 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	NOL4	O94818	638 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	PTPRO	Q16827	1216 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	CERS3	Q8IU89	383 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	GOLGA5	Q8TBA6	731 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	CERK	Q8TCT0	537 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	LSM14B	Q9BX40	385 aa	Known RBP	12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	BCAS3	Q9H6U6	928 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	PSD3	Q9NYI0	1048 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	COL4A3BP	Q9Y5P4	624 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	POTEF	A5A3E0	1075 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	TRIM66	O15016	1216 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	POTEI	P0CG38	1075 aa		12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	CLK2	P49760	499 aa	Known RBP	12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	MRPL12	P52815	198 aa	Known RBP	12.75	□□□□□ -0.37
NOP2-223	ENST00000620535	FKBP3	Q00688	224 aa	Known RBP	12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms