RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 ERLIN1O75477 346 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 FGFR1OPO95684 399 aaKnown RBP12.43□□□□□ -0.42
TP53-223ENST00000618944 NPR1P16066 1061 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 CERKLQ49MI3 558 aaPredicted RBP12.43□□□□□ -0.42
TP53-223ENST00000618944 PAPD7Q5XG87 772 aaKnown RBP12.43□□□□□ -0.42
TP53-223ENST00000618944 SLFN13Q68D06 897 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 PPP1R18Q6NYC8 613 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 POTEBQ6S5H4 581 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 HHIPL2Q6UWX4 724 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 LRRC55Q6ZSA7 311 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 TMC4Q7Z404 712 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 CAGE1Q8TC20 777 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 TSG101Q99816 390 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 NLRC4Q9NPP4 1024 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 BMP2KQ9NSY1 1161 aaPredicted RBP12.43□□□□□ -0.42
TP53-223ENST00000618944 PLAGL2Q9UPG8 496 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 PCDHA13Q9Y5I0 950 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 CDK5RAP2Q96SN8 1893 aa12.43□□□□□ -0.42
TP53-223ENST00000618944 GDF11O95390 407 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 PLA2G4BP0C869 781 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 VAV2P52735 878 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 APBA1Q02410 837 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 LRRC63Q05C16 580 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 SEPT2Q15019 361 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 FIGNQ5HY92 759 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 MSL1Q68DK7 614 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 CACNA2D4Q7Z3S7 1137 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 COL23A1Q86Y22 540 aaPredicted RBP12.42□□□□□ -0.42
TP53-223ENST00000618944 SECISBP2LQ93073 1101 aaKnown RBP12.42□□□□□ -0.42
TP53-223ENST00000618944 CRACR2AQ9BSW2 395 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 IFIH1Q9BYX4 1025 aaKnown RBP12.42□□□□□ -0.42
TP53-223ENST00000618944 LRRC27Q9C0I9 530 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
TP53-223ENST00000618944 AKR1B10O60218 316 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 MOCS3O95396 460 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 CYP2C19P33261 490 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 KIF11P52732 1056 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 TUBB4BP68371 445 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 EHHADHQ08426 723 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 IKQ13123 557 aaPredicted RBP12.42□□□□□ -0.42
TP53-223ENST00000618944 PSMD2Q13200 908 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 CDC37Q16543 378 aaPredicted RBP12.42□□□□□ -0.42
TP53-223ENST00000618944 USH1GQ495M9 461 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 CCDC40Q4G0X9 1142 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 HERC4Q5GLZ8 1057 aaPredicted RBP12.42□□□□□ -0.42
TP53-223ENST00000618944 FAM26FQ5R3K3 315 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 PSMB7Q99436 277 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 POLD4Q9HCU8 107 aa12.42□□□□□ -0.42
TP53-223ENST00000618944 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.42□□□□□ -0.42
TP53-223ENST00000618944 PDE2AO00408 941 aaPredicted RBP12.41□□□□□ -0.42
TP53-223ENST00000618944 MEIS1O00470 390 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 ALDH1B1P30837 517 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 KCNMA1Q12791 1236 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 PRR16Q569H4 304 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 SH3BP5LQ7L8J4 393 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 CCDC84Q86UT8 332 aaPredicted RBP12.41□□□□□ -0.42
TP53-223ENST00000618944 GPBP1Q86WP2 473 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 SIAH1Q8IUQ4 282 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 EHBP1Q8NDI1 1231 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 NEK11Q8NG66 645 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 MTMR8Q96EF0 704 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 GDAP1L1Q96MZ0 367 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 P2RX7Q99572 595 aaKnown RBP12.41□□□□□ -0.42
TP53-223ENST00000618944 TRIM34Q9BYJ4 488 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 USO1O60763 962 aaKnown RBP12.41□□□□□ -0.42
TP53-223ENST00000618944 MED24O75448 989 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 KRT18P05783 430 aaKnown RBP12.41□□□□□ -0.42
TP53-223ENST00000618944 MMP10P09238 476 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 POTEIP0CG38 1075 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 USP14P54578 494 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 CDK17Q00537 523 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 FKBP3Q00688 224 aaKnown RBP12.41□□□□□ -0.42
TP53-223ENST00000618944 GFPT1Q06210 699 aaPredicted RBP12.41□□□□□ -0.42
TP53-223ENST00000618944 CASP8Q14790 479 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 ENOX2Q16206 610 aaKnown RBP12.41□□□□□ -0.42
TP53-223ENST00000618944 POTEGQ6S5H5 508 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 POTEEQ6S8J3 1075 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 ZNF662Q6ZS27 426 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 KRT27Q7Z3Y8 459 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 BAP1Q92560 729 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 CCDC17Q96LX7 622 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 ANO3Q9BYT9 981 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 FAM198AQ9UFP1 575 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 COL4A3BPQ9Y5P4 624 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 CAPN6Q9Y6Q1 641 aa12.41□□□□□ -0.42
TP53-223ENST00000618944 GCFC2P16383 781 aaKnown RBP12.4□□□□□ -0.42
TP53-223ENST00000618944 CXCR5P32302 372 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 PSMC6P62333 389 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 MRPS25P82663 173 aaKnown RBP12.4□□□□□ -0.42
TP53-223ENST00000618944 NLGN1Q8N2Q7 840 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 VPS18Q9P253 973 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 LRRIQ3A6PVS8 624 aaPredicted RBP12.4□□□□□ -0.42
TP53-223ENST00000618944 F5H6K3 240 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 MEIS2O14770 477 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 PHACTR2O75167 634 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 HNRNPH3P31942 346 aaKnown RBP12.4□□□□□ -0.42
TP53-223ENST00000618944 HSPA1LP34931 641 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 MAGEA1P43355 309 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 RASSF7Q02833 373 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms