RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 Q4G0T1 1027 aa28.31■■■□□ 2.12
VEGFC-202ENST00000618562 PRR16Q569H4 304 aa28.31■■■□□ 2.12
VEGFC-202ENST00000618562 TOGARAM2Q6ZUX3 1019 aa28.31■■■□□ 2.12
VEGFC-202ENST00000618562 ETNPPLQ8TBG4 499 aa28.31■■■□□ 2.12
VEGFC-202ENST00000618562 RPAP3Q9H6T3 665 aaPredicted RBP28.31■■■□□ 2.12
VEGFC-202ENST00000618562 CCPG1Q9ULG6 757 aa28.31■■■□□ 2.12
VEGFC-202ENST00000618562 CYP3A4P08684 503 aa28.31■■■□□ 2.12
VEGFC-202ENST00000618562 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.31■■■□□ 2.12
VEGFC-202ENST00000618562 V9GYY5 206 aaPredicted RBP28.31■■■□□ 2.12
VEGFC-202ENST00000618562 FLOT1O75955 427 aa28.3■■■□□ 2.12
VEGFC-202ENST00000618562 DLK2Q6UY11 383 aa28.3■■■□□ 2.12
VEGFC-202ENST00000618562 SNX29Q8TEQ0 813 aa28.3■■■□□ 2.12
VEGFC-202ENST00000618562 CCDC51Q96ER9 411 aa28.3■■■□□ 2.12
VEGFC-202ENST00000618562 SLC38A10Q9HBR0 1119 aa28.3■■■□□ 2.12
VEGFC-202ENST00000618562 PPP1R9AQ9ULJ8 1098 aa28.3■■■□□ 2.12
VEGFC-202ENST00000618562 ZHX2Q9Y6X8 837 aa28.3■■■□□ 2.12
VEGFC-202ENST00000618562 KRT79Q5XKE5 535 aa28.3■■■□□ 2.12
VEGFC-202ENST00000618562 ANKRD20A12PQ8NF67 263 aa28.3■■■□□ 2.12
VEGFC-202ENST00000618562 BLOC1S4Q9NUP1 217 aa28.3■■■□□ 2.12
VEGFC-202ENST00000618562 OGFRQ9NZT2 677 aa28.3■■■□□ 2.12
VEGFC-202ENST00000618562 KLRC4O43908 158 aa28.29■■■□□ 2.12
VEGFC-202ENST00000618562 RBL2Q08999 1139 aa28.29■■■□□ 2.12
VEGFC-202ENST00000618562 KCNB1Q14721 858 aa28.29■■■□□ 2.12
VEGFC-202ENST00000618562 NOL9Q5SY16 702 aaKnown RBP28.29■■■□□ 2.12
VEGFC-202ENST00000618562 CNGA4Q8IV77 575 aa28.29■■■□□ 2.12
VEGFC-202ENST00000618562 NELFBQ8WX92 580 aa28.29■■■□□ 2.12
VEGFC-202ENST00000618562 MFAP3LO75121 409 aa28.28■■■□□ 2.12
VEGFC-202ENST00000618562 KRT31Q15323 416 aa28.28■■■□□ 2.12
VEGFC-202ENST00000618562 SLFN12Q8IYM2 578 aa28.28■■■□□ 2.12
VEGFC-202ENST00000618562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.28■■■□□ 2.12
VEGFC-202ENST00000618562 STK17AQ9UEE5 414 aa28.28■■■□□ 2.12
VEGFC-202ENST00000618562 RLFQ13129 1914 aa28.28■■■□□ 2.12
VEGFC-202ENST00000618562 TBX3O15119 743 aa28.28■■■□□ 2.12
VEGFC-202ENST00000618562 FANCGO15287 622 aa28.28■■■□□ 2.12
VEGFC-202ENST00000618562 CBX1P83916 185 aa28.28■■■□□ 2.12
VEGFC-202ENST00000618562 PRKG1Q13976 671 aa28.28■■■□□ 2.12
VEGFC-202ENST00000618562 KMT5BQ4FZB7 885 aa28.28■■■□□ 2.12
VEGFC-202ENST00000618562 TMEM119Q4V9L6 283 aa28.28■■■□□ 2.12
VEGFC-202ENST00000618562 CYP2W1Q8TAV3 490 aa28.28■■■□□ 2.12
VEGFC-202ENST00000618562 TRIM9Q9C026 710 aa28.28■■■□□ 2.12
VEGFC-202ENST00000618562 USP2O75604 605 aaPredicted RBP28.27■■■□□ 2.12
VEGFC-202ENST00000618562 TPM1P09493 284 aa28.27■■■□□ 2.12
VEGFC-202ENST00000618562 CCDC175P0C221 793 aa28.27■■■□□ 2.12
VEGFC-202ENST00000618562 FECHP22830 423 aa28.27■■■□□ 2.12
VEGFC-202ENST00000618562 CDK5RAP3Q96JB5 506 aa28.27■■■□□ 2.12
VEGFC-202ENST00000618562 DDX41Q9UJV9 622 aaKnown RBP28.27■■■□□ 2.12
VEGFC-202ENST00000618562 ECM1Q16610 540 aa28.27■■■□□ 2.12
VEGFC-202ENST00000618562 CPXCR1Q8N123 301 aa28.27■■■□□ 2.12
VEGFC-202ENST00000618562 CLEC4DQ8WXI8 215 aa28.27■■■□□ 2.12
VEGFC-202ENST00000618562 C12orf42Q96LP6 360 aa28.27■■■□□ 2.12
VEGFC-202ENST00000618562 C7orf25Q9BPX7 421 aa28.27■■■□□ 2.12
VEGFC-202ENST00000618562 RAVER2Q9HCJ3 691 aaKnown RBP28.27■■■□□ 2.12
VEGFC-202ENST00000618562 ADM5C9JUS6 153 aa28.26■■■□□ 2.11
VEGFC-202ENST00000618562 HSD17B4P51659 736 aa28.26■■■□□ 2.11
VEGFC-202ENST00000618562 HMGCS2P54868 508 aa28.26■■■□□ 2.11
VEGFC-202ENST00000618562 SPIRE1Q08AE8 756 aa28.26■■■□□ 2.11
VEGFC-202ENST00000618562 TRIM14Q14142 442 aa28.26■■■□□ 2.11
VEGFC-202ENST00000618562 FBXO38Q6PIJ6 1188 aa28.26■■■□□ 2.11
VEGFC-202ENST00000618562 DCPSQ96C86 337 aaKnown RBP28.26■■■□□ 2.11
VEGFC-202ENST00000618562 PAPPA2Q9BXP8 1791 aa28.26■■■□□ 2.11
VEGFC-202ENST00000618562 IGLV3-22A0A075B6J6 115 aa28.25■■■□□ 2.11
VEGFC-202ENST00000618562 NFIBO00712 420 aa28.25■■■□□ 2.11
VEGFC-202ENST00000618562 URI1O94763 535 aaPredicted RBP28.25■■■□□ 2.11
VEGFC-202ENST00000618562 TCP11X2Q5H9J9 407 aa28.25■■■□□ 2.11
VEGFC-202ENST00000618562 KCNK18Q7Z418 384 aa28.25■■■□□ 2.11
VEGFC-202ENST00000618562 ADSSL1Q8N142 457 aa28.25■■■□□ 2.11
VEGFC-202ENST00000618562 GDAQ9Y2T3 454 aa28.25■■■□□ 2.11
VEGFC-202ENST00000618562 N4BP3O15049 544 aa28.25■■■□□ 2.11
VEGFC-202ENST00000618562 MSH4O15457 936 aa28.25■■■□□ 2.11
VEGFC-202ENST00000618562 GYPCP04921 128 aa28.25■■■□□ 2.11
VEGFC-202ENST00000618562 CASQ1P31415 396 aa28.25■■■□□ 2.11
VEGFC-202ENST00000618562 PRCPP42785 496 aa28.25■■■□□ 2.11
VEGFC-202ENST00000618562 COPB1P53618 953 aaKnown RBP28.25■■■□□ 2.11
VEGFC-202ENST00000618562 GNG11P61952 73 aa28.25■■■□□ 2.11
VEGFC-202ENST00000618562 ERCC6LQ2NKX8 1250 aa28.25■■■□□ 2.11
VEGFC-202ENST00000618562 LARP4BQ92615 738 aaKnown RBP28.25■■■□□ 2.11
VEGFC-202ENST00000618562 SPDYE4A6NLX3 237 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 KCNJ18B7U540 433 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 C19orf81C9J6K1 198 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 RHOBTB3O94955 611 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 ZNF76P36508 570 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 STAT3P40763 770 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 KCNJ12Q14500 433 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 MCM6Q14566 821 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 HYIQ5T013 277 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 SULF1Q8IWU6 871 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 RAD54LQ92698 747 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 FAM20AQ96MK3 541 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 OTOFQ9HC10 1997 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 RBBP6Q7Z6E9 1792 aaKnown RBP28.24■■■□□ 2.11
VEGFC-202ENST00000618562 WDR90Q96KV7 1748 aa28.24■■■□□ 2.11
VEGFC-202ENST00000618562 SOWAHDA6NJG2 315 aa28.23■■■□□ 2.11
VEGFC-202ENST00000618562 CCT6AP40227 531 aaKnown RBP28.23■■■□□ 2.11
VEGFC-202ENST00000618562 UBXN2AP68543 259 aa28.23■■■□□ 2.11
VEGFC-202ENST00000618562 AMPD3Q01432 767 aa28.23■■■□□ 2.11
VEGFC-202ENST00000618562 SV2BQ7L1I2 683 aa28.23■■■□□ 2.11
VEGFC-202ENST00000618562 MNS1Q8NEH6 495 aa28.23■■■□□ 2.11
VEGFC-202ENST00000618562 WNK4Q96J92 1243 aa28.23■■■□□ 2.11
VEGFC-202ENST00000618562 COL11A1P12107 1806 aaPredicted RBP28.23■■■□□ 2.11
VEGFC-202ENST00000618562 VWA5AO00534 786 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms